Protein

View in Explore
Genbank accession
QBQ72660.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAEYRHTETGEVKTQGQWRSHYSNVSLPRTWKQATLDGLNLEAVLEAPKPTTGQYETAARNGVTQDANNNWVTAWEVRDMFTSYTDEEGVFHSKLEQEQAYQAGLDAKVAESNRTKRDGLLDDSDWTQMNDSPLTNEVKTAWATYRQELRGITDLDAWPNLADDDWPVQP
Physico‐chemical
properties
protein length:170 AA
molecular weight: 19395,83830 Da
isoelectric point:4,53521
aromaticity:0,09412
hydropathy:-0,97176

Domains

Domains [InterPro]
DC_0635
STR
1–157
DC_0635
G3DSA:6.10.140.1310
STR
72–150
G3DSA:6.10.140.1310
IPR031893
ENZ
111–170
IPR031893
QBQ72660.1
1 170
Architecture
STR
ENZ
STR 1-157 | ENZ 158-170
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-4
[NCBI] 		2559283 Uroviricota > Caudoviricetes > Zobellviridae > Veravirus >
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72660.1 [NCBI]
Genbank nucleotide accession
MK613346.1 [NCBI]
CDS location
range 34395 -> 34907
strand -
CDS
ATGGCTGAATATCGACACACAGAAACAGGCGAAGTTAAGACCCAAGGGCAATGGCGGAGCCACTACAGCAACGTCTCACTGCCTCGTACATGGAAGCAAGCAACTCTGGATGGCCTCAACTTAGAGGCTGTCCTAGAGGCTCCTAAGCCTACTACAGGTCAGTACGAGACTGCAGCCCGTAACGGTGTAACTCAGGATGCTAATAACAACTGGGTCACTGCATGGGAAGTTCGTGACATGTTCACTAGCTACACTGACGAGGAAGGTGTCTTCCACAGTAAGCTAGAACAAGAGCAGGCCTACCAAGCTGGTCTAGATGCTAAGGTAGCTGAGTCTAATCGTACTAAACGAGATGGTCTCTTAGATGATAGTGACTGGACACAGATGAATGACAGTCCTCTCACTAACGAAGTAAAGACTGCATGGGCTACTTACCGTCAAGAGCTACGAGGTATCACAGACCTAGACGCATGGCCTAACCTAGCAGATGACGACTGGCCTGTACAACCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
09cb9663b0155465c68c8afcdab74a4af3fdd010e400286881cd6f4db2d0d978
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9522
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank