Protein

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Genbank accession
YP_003969142.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNNNIKYHISDSADSVFFSGPDWPSSVETVSDALNEIAPWALTVNGLPIATEVVPGIIRIATEAEAAAGMSDNTVITPNLLRIAMQTPQATDAIIGNTRYATNDEALALSINTAAITPSKLGYVIANKGSTEAARGTIRISTAAQAISGTDDTTAMTPLKTKQAIAHFSESWGTATESSDGVVRLATLAQALAGVLRDGYAVSPYTLSRMAGTESSAGLLKVATNSQTLALADNTVVITPAKLSILNATSTQKGLVRLLNTESSQANTALSANAQVLYRSGGTMTGNINFTENNQGILWNRNTDLAAITFKNDSDVDTNSYLLFAVGDNNNEYFRWTTRTNDVDTTIATLRPGGHLWLAGNIDINDMYVRCDTRLKTDIQPIKDALVKIDSLDAGIYTKHKSLTDNTVIGKEAGIFAQQLQKVLPEGVKTLDDGTLTVSPMSLIALLIEANKELKSRLEKLEEKI
Physico‐chemical
properties
protein length:465 AA
molecular weight: 49641,33360 Da
isoelectric point:4,99782
aromaticity:0,05161
hydropathy:-0,09828

Domains

Domains [InterPro]
DC_0176
STR
1–426
DC_0176 Coil
IPR030392
CHP
371–429
IPR030392
IPR030392
CHP
372–465
IPR030392
DC_0262
RBD
415–465
DC_0262
YP_003969142.1
1 465
Architecture
STR
RBD
STR 1-426 | RBD 427-465
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage phiAS4
[NCBI] 		879628 Uroviricota > Caudoviricetes > Pantevenvirales > Tulanevirus > Tulanevirus as4
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_003969142.1 [NCBI]
Genbank nucleotide accession
NC_014635 [NCBI]
CDS location
range 81700 -> 83097
strand -
CDS
ATGAATAACAATATCAAATATCATATTTCGGATTCAGCGGATTCGGTATTTTTCTCTGGGCCAGATTGGCCCAGTTCAGTTGAAACCGTATCAGACGCATTGAATGAAATAGCGCCATGGGCATTAACTGTTAATGGCCTGCCGATAGCAACTGAGGTTGTACCTGGCATCATTAGAATTGCTACTGAAGCTGAAGCCGCAGCTGGCATGAGTGACAATACTGTTATTACTCCTAATCTTCTGCGGATTGCGATGCAGACGCCGCAGGCTACCGACGCCATTATTGGTAATACTCGTTACGCAACAAATGACGAAGCTTTGGCCTTATCTATTAACACCGCTGCAATAACACCTTCGAAACTGGGGTATGTCATTGCAAATAAAGGTTCTACCGAAGCGGCAAGAGGAACAATCCGTATATCGACTGCTGCCCAGGCAATATCTGGCACCGACGATACCACTGCTATGACTCCTCTTAAGACCAAGCAGGCTATTGCGCATTTCTCAGAATCATGGGGAACTGCAACAGAAAGCTCAGACGGAGTTGTCCGTTTGGCCACATTGGCTCAAGCTTTAGCAGGAGTTCTTAGAGATGGCTATGCTGTTAGTCCATATACTTTATCAAGAATGGCAGGGACGGAAAGCTCAGCTGGATTGCTTAAAGTAGCAACAAATTCGCAAACATTAGCATTAGCTGATAACACTGTCGTTATTACTCCAGCTAAACTTTCCATATTGAATGCTACTAGCACTCAAAAAGGATTAGTTCGCCTTCTTAATACTGAAAGCTCACAGGCGAATACGGCTCTTTCTGCTAATGCCCAGGTGTTGTATCGCTCAGGTGGCACAATGACTGGTAATATCAATTTCACAGAAAACAATCAAGGAATTTTGTGGAATAGAAATACCGATTTGGCTGCTATAACATTCAAAAACGATAGTGACGTTGACACGAATTCGTATTTGCTTTTTGCTGTTGGAGACAATAACAACGAGTATTTTAGATGGACAACTCGCACCAATGACGTAGATACCACAATTGCTACGCTTAGGCCAGGTGGTCATTTATGGCTAGCCGGAAACATCGACATTAACGATATGTATGTTCGTTGCGATACCAGGTTAAAAACTGATATTCAGCCTATCAAAGATGCACTCGTAAAAATAGATAGCCTTGACGCTGGGATTTACACAAAACATAAATCTTTGACTGACAATACCGTGATAGGCAAAGAGGCAGGTATTTTTGCTCAGCAATTGCAAAAAGTTTTACCAGAAGGCGTCAAAACACTTGACGACGGAACTCTTACTGTTTCTCCAATGTCTCTCATTGCATTACTGATTGAGGCTAATAAAGAGCTTAAATCCAGATTAGAAAAACTCGAGGAAAAAATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
bc34162083217d4e9dc9b73a2f6ff8aee2c8d14abda24466556ad10e7d5a4aac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7784
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50