Protein

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Genbank accession
AUR88409.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MATDSLMMAESSHSIYVNRLASQEVNKLNEFWGGYLRLLQNALGGYDSAMTQRQFNRLIKDVDGVITSNMEEWQHQLTLDLDEFAEYETDFQARMIGAVTDQDIAVPASSQVIAAAIANPIQTGAGAIQLEEWLTDVSTKQRQRIEGEIKIGYSNGVPNAEIVQRIVGTRANKFTDGIAEVDRRSAVTLVRTSTNHYANEARKQVYKENKRVVIGHRWVSTLDKRTSNICRDRDGDVYIYADEGAVFYPPAHANCLLGDTNVTTSATVANIYERTFKGTMIQITCESGRNITITPNHPILTNRGWVKAAEVDKFDKLIAMSESTLVKHEEYGISSKFEDMSSAFDVPVNSGFIASRPTTTKDFHGDGIANSYVNIVDVHGFRRNTLDTTTAKEVDNGGFMDRVGVNNAFNGFGSLNLLFSAALSSLNRAVSCRGKVSDLLWGASIHPSFLLLRSISKRAVNRLKVSNYWCGAAAKAKLANNALCANAGFVSSADSSLFGVGKFDSLGEGNFNACSSESSLDWFFSNAEELANLTAANLVDGVELDNVVDLTLREFDSVHVYNLENDVNWYTSNGIITHNCRSSTSPLVKGYNVDNPNGKRSSKGGKLVDGESKQDPKQVSATQTYYDWLKNQPAQFQDEVLGQTKGKIFRNSGVSVEKFKTLMIDRMNKPMTIDQMAAKDKQIADYLKKIK
Physico‐chemical
properties
protein length:691 AA
molecular weight: 76285,70180 Da
isoelectric point:6,12312
aromaticity:0,08394
hydropathy:-0,35268

Domains

Domains [InterPro]
DC_1147
ATT
1–148
DC_1147 G3DSA:2.170.16.10 IPR030934
IPR006528
RBD
116–255
IPR006528 IPR006141 DC_0892
IPR006528
RBD
125–255
IPR006528 IPR006141
G3DSA:2.170.16.10
RBD
232–350
G3DSA:2.170.16.10
IPR036844
STR
244–580
IPR036844
IPR003587
STR
253–321
IPR003587
cd00081
RBD
268–318
cd00081
AUR88409.1
1 691
Architecture
ATT
RBD
STR
RBD
ATT 1-148 | RBD 149-243 | STR 244-580 | RBD 581-691
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR88409.1
1 691
Domain Start End Length (AA) Confidence
N-terminal 1 263 263 0,9065
Central domain 264 462 200 0,6750
C-terminal 463 691 228 0,5326
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-263
Central
264-462
C-terminal
463-691

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.113.A._10N.286.51.E7
[NCBI] 		1881426 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR88409.1 [NCBI]
Genbank nucleotide accession
MG592487 [NCBI]
CDS location
range 4963 -> 7038
strand +
CDS
ATGGCAACTGACAGCTTAATGATGGCTGAATCTTCACACAGTATTTACGTGAATAGACTCGCATCACAAGAGGTAAATAAACTTAATGAGTTCTGGGGTGGTTACTTGCGACTACTCCAGAATGCGCTTGGTGGCTACGATAGTGCAATGACGCAGCGACAGTTCAACAGGCTAATAAAAGACGTTGACGGCGTTATCACTTCGAATATGGAGGAATGGCAGCATCAACTAACACTAGACCTTGATGAGTTTGCAGAATACGAAACTGACTTTCAAGCTCGTATGATTGGTGCTGTTACCGACCAAGATATTGCCGTCCCTGCATCATCGCAAGTTATCGCGGCCGCAATTGCCAATCCAATTCAAACTGGTGCTGGTGCTATTCAGCTTGAAGAGTGGTTGACCGATGTATCAACAAAGCAACGACAACGAATCGAGGGTGAAATCAAGATTGGTTATTCAAACGGCGTACCAAATGCTGAAATAGTTCAGCGTATCGTAGGCACTCGCGCCAACAAGTTCACAGATGGCATTGCGGAGGTTGATAGACGTAGCGCTGTTACTTTGGTTAGAACATCAACCAACCATTACGCCAATGAAGCACGTAAGCAGGTATACAAAGAAAACAAGCGCGTCGTTATTGGCCATAGATGGGTGTCAACACTGGATAAGCGTACGAGCAATATATGCCGAGACCGTGATGGTGATGTGTATATTTATGCAGATGAAGGGGCGGTTTTTTATCCGCCCGCACATGCTAACTGTTTACTTGGAGACACTAACGTAACGACCAGTGCTACAGTCGCGAACATTTACGAAAGGACATTCAAAGGAACTATGATCCAAATCACTTGTGAATCCGGTCGTAATATCACCATTACCCCAAACCATCCAATACTTACCAATAGGGGCTGGGTTAAGGCTGCAGAGGTTGATAAGTTCGATAAGCTTATCGCCATGAGTGAATCCACGCTTGTCAAACATGAGGAATATGGTATCTCTTCCAAGTTCGAAGATATGTCTAGTGCGTTCGATGTACCTGTTAATTCTGGTTTCATCGCTTCTAGACCAACCACCACCAAAGACTTCCACGGCGACGGTATCGCCAACAGCTATGTCAACATTGTAGATGTGCATGGCTTTAGACGGAATACACTCGATACCACTACAGCGAAGGAAGTCGACAACGGTGGATTCATGGATAGAGTTGGGGTTAACAACGCCTTCAATGGTTTTGGCTCTCTTAATCTTCTCTTCAGTGCTGCGCTTTCTTCCCTTAACCGCGCTGTGAGCTGCAGAGGTAAGGTAAGCGATTTGCTCTGGGGTGCTTCTATCCATCCTAGCTTTTTGTTGTTGAGATCTATTTCTAAGCGTGCCGTAAATAGACTTAAGGTATCTAATTACTGGTGCGGCGCTGCAGCTAAGGCCAAGCTCGCCAACAATGCCCTTTGCGCCAATGCCGGATTCGTAAGCTCTGCAGATAGCAGCCTTTTCGGAGTCGGTAAATTTGACAGCCTTGGTGAAGGAAATTTCAATGCCTGCAGTAGTGAGAGCTCTCTGGATTGGTTTTTCTCCAACGCCGAAGAGCTTGCCAATCTTACTGCAGCCAATCTTGTCGATGGTGTAGAGCTTGATAATGTCGTCGATTTGACTTTGCGTGAATTCGATTCTGTTCATGTTTATAACCTCGAAAATGATGTTAATTGGTATACGTCGAATGGCATTATAACACACAACTGCCGTAGCTCAACGTCTCCATTAGTTAAAGGTTACAACGTCGATAACCCAAACGGTAAGCGCTCATCTAAAGGCGGTAAGCTTGTAGATGGTGAGTCAAAACAAGACCCTAAACAAGTTAGCGCAACGCAGACTTATTACGACTGGCTCAAGAATCAACCTGCGCAATTTCAAGATGAAGTGCTAGGCCAAACGAAAGGCAAGATATTCCGAAACTCCGGCGTATCAGTCGAGAAATTCAAAACCCTGATGATTGACCGCATGAATAAACCTATGACAATCGACCAAATGGCAGCGAAAGATAAGCAGATAGCTGATTATCTAAAGAAGATTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c598bed7aa3b49a19902b25c5fd3982b5836681e8e19955be3e16ad76744f08a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6144
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank