Protein

View in Explore
Genbank accession
QHJ75315.1 [GenBank]
Protein name
tail tubular B
RBP type
TSP
Evidence DepoScope
Probability 0,81
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MSTYEASYKSLLQGVSQQLPEERLPGQLTSQVNMVSDPVTNLRRRPGVLFRKSWAWASADYEHSLGWFTDIAGSRVHILLNTNTGNIRILNENFVEEASLNAGAYLINADPTHIRATSVGNEFFLCNVDKSPVVQYGTTDPNPANSGFFYIVSGAFSKGYNVNIVHGDGALTATYTTPSGTGSGDAALATPEYIAEQLYNQLAGNSFSDVRITGVNGTGTGYVYDFQLQENIGSSITPNWVNRTAPFEMTAARIANGFLRFRYESEDGEAVSFNFQVKVGGTWKSTVYTSSSIALYWTDYGQPAYETVPLTLFTSQVTLSGDPTLFVQRDGPYVFVSRAGGISVNTSVGSGFMVASKSGVVPSTGGLPARLPSAANGFICRVGTGDSPQYYRYNHLTTEWSETGAWGSPNSITNVPISILWNGTAWALNTKAFDGRNAGDDDSNELHEWMTYGITGMGTYQGRLVLMSGPLVSLSASNKPRQFFRSTVSSLLNSDAIEVGAGMNSAAAYEWAIPFQKDLVLFSRTYQAVIPSGNSAITPATATVVPTSAHETDTTSSPITLGRTLMYCTSKSEDFFGAMEMIPSNYTDSQYVSQDSTPHLPKYMGGRCRFAVSSGVASLALFSPSGDPYSLVVHEYHWDGDSKVQQAWHQWTFEYPIAYAYFASDVVVLAFIQNGNIVLGTVDPRAGALNASSERRPFLDLNVSASIVDNTVTIPAWMLAFDPAIRAKLKLVMVTGALAGEEVGFTNGATANTLTTALSHPSGTVGIGIPYYSGVIPSPPVVKDYNDQTIHSGKATLQRYMVGTKNSSEFTVNVTDAYSTGEDLAVPTLSWSSPELELGRGLYADTSISIVPCRTDLRSTAMEVSTEGTGELNITSLEYVAKYHPKIKRR
Physico‐chemical
properties
protein length:890 AA
molecular weight: 96137,14700 Da
isoelectric point:5,21591
aromaticity:0,10674
hydropathy:-0,14404

Domains

Domains [InterPro]
IPR058003
TTP
1–212
IPR058003 DC_0058
DC_0173
ATT
1–237
DC_0173 IPR058003
QHJ75315.1
1 890
Architecture
ATT
STR
ATT 1-237 | STR 240-890
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHJ75315.1
1 890
Domain Start End Length (AA) Confidence
N-terminal 1 135 135 0,9735
Central domain 136 370 236 0,7896
C-terminal 371 890 519 0,2889
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-135
Central
136-370
C-terminal
371-890

Taxonomy

  Name Taxonomy ID Lineage
Phage Sphaerotilus phage vB_SnaP-R1
[NCBI] 		2696336 Uroviricota > Caudoviricetes > Autographivirales > Natansvirus > Natansvirus SnaPR1
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHJ75315.1 [NCBI]
Genbank nucleotide accession
MN844877 [NCBI]
CDS location
range 24137 -> 26809
strand +
CDS
ATGAGCACTTACGAAGCTTCATACAAGTCCCTACTGCAAGGCGTTTCCCAGCAACTGCCGGAGGAACGCCTGCCGGGGCAACTGACCTCGCAGGTCAACATGGTGTCCGATCCTGTGACGAACCTGCGCCGCCGCCCCGGCGTGCTGTTTCGTAAGTCGTGGGCTTGGGCCAGTGCCGACTACGAGCACTCGCTCGGGTGGTTCACCGACATCGCCGGTTCGCGGGTGCACATCCTGCTGAACACGAACACCGGGAACATCCGCATCCTGAACGAGAACTTCGTGGAGGAAGCGAGCTTGAACGCAGGCGCGTACCTCATCAACGCCGACCCGACCCACATCCGGGCGACCTCGGTGGGCAACGAGTTCTTCCTGTGCAACGTGGACAAGTCGCCCGTTGTGCAGTACGGCACGACCGATCCGAACCCGGCGAACTCCGGCTTCTTCTACATCGTGTCGGGCGCGTTCAGTAAGGGCTACAACGTGAACATCGTGCACGGTGACGGGGCACTAACGGCCACGTACACCACACCCTCGGGCACCGGCTCCGGGGACGCTGCACTCGCAACCCCTGAGTACATCGCCGAGCAACTGTACAACCAACTCGCAGGCAACTCGTTCAGCGACGTTCGCATCACTGGTGTGAACGGCACCGGGACGGGTTACGTGTACGACTTCCAACTGCAAGAGAACATCGGCAGCAGCATCACGCCGAACTGGGTGAACCGCACTGCGCCGTTTGAAATGACCGCAGCCCGCATCGCTAACGGCTTCCTGCGCTTCCGGTACGAATCGGAGGACGGCGAGGCTGTGTCGTTCAACTTCCAAGTGAAGGTGGGCGGGACGTGGAAAAGCACCGTGTACACGAGCAGCAGCATCGCGCTGTACTGGACGGACTACGGCCAACCCGCGTACGAGACTGTGCCGCTCACGTTGTTCACCTCGCAGGTGACGCTGAGTGGCGACCCCACCCTGTTCGTGCAGCGCGACGGCCCGTACGTGTTCGTGTCGCGTGCCGGGGGCATCAGCGTGAACACCAGCGTCGGCTCGGGGTTCATGGTGGCGTCGAAGTCGGGTGTGGTTCCCAGCACTGGGGGCTTGCCTGCACGACTGCCCAGCGCGGCCAACGGCTTCATCTGCCGCGTCGGCACCGGGGACTCGCCGCAATACTATCGGTACAACCACCTCACGACTGAGTGGAGTGAGACAGGTGCATGGGGAAGCCCGAACAGCATCACGAACGTGCCGATCAGCATTCTGTGGAACGGTACGGCGTGGGCGTTGAACACCAAGGCTTTCGATGGCCGCAACGCGGGCGATGACGACTCGAACGAGTTGCACGAGTGGATGACGTACGGCATCACCGGCATGGGCACCTACCAAGGACGCCTCGTGCTGATGTCCGGGCCGCTGGTGTCTCTCAGCGCCAGCAACAAGCCCCGGCAGTTCTTCCGCAGCACGGTGTCGAGCCTGCTGAACTCGGACGCAATCGAAGTCGGCGCAGGCATGAACAGTGCCGCCGCGTACGAGTGGGCCATCCCGTTCCAGAAAGACCTCGTGCTGTTCAGTCGGACGTATCAGGCCGTGATCCCCTCGGGGAACTCTGCCATCACCCCGGCCACGGCCACGGTGGTGCCGACCTCGGCGCACGAGACTGACACGACGAGCAGCCCGATCACGTTGGGCCGCACGCTGATGTACTGCACCTCGAAGTCTGAGGACTTCTTCGGCGCGATGGAAATGATCCCGTCGAACTACACGGACTCTCAGTACGTGTCGCAGGACAGCACGCCGCACCTCCCGAAGTACATGGGCGGGCGCTGCCGGTTCGCTGTGTCGTCTGGTGTGGCCTCGCTGGCGCTGTTCTCCCCGAGCGGCGACCCGTACAGCCTCGTCGTGCACGAGTACCACTGGGACGGTGACAGCAAGGTGCAGCAGGCATGGCATCAGTGGACGTTCGAGTACCCAATCGCGTACGCGTACTTCGCGAGCGACGTGGTGGTGTTGGCGTTCATCCAGAACGGGAACATCGTGCTCGGTACGGTTGACCCGCGTGCGGGTGCGCTGAACGCTTCGAGCGAGCGCCGCCCATTCCTCGACCTGAACGTGTCGGCGAGCATCGTGGACAACACGGTGACGATCCCGGCATGGATGCTGGCGTTTGACCCGGCCATCCGGGCCAAGCTCAAGCTCGTCATGGTGACGGGTGCGCTGGCCGGTGAGGAAGTGGGCTTCACGAACGGGGCCACGGCGAACACGCTGACCACTGCGCTGTCGCACCCGAGCGGCACCGTGGGCATTGGCATCCCGTATTACAGCGGGGTGATTCCGTCGCCGCCTGTGGTGAAGGACTACAACGACCAGACGATCCACTCGGGCAAGGCAACGCTGCAACGCTACATGGTGGGCACCAAGAACTCGTCCGAGTTCACGGTGAACGTCACGGATGCGTACAGCACTGGCGAAGACCTCGCCGTGCCCACGTTGTCGTGGTCGAGTCCCGAGCTTGAACTGGGCCGTGGCCTGTACGCTGACACAAGCATCAGCATCGTTCCGTGTCGAACTGACCTCCGCAGCACTGCGATGGAGGTGTCAACAGAAGGCACGGGTGAACTCAACATCACGTCACTGGAATACGTGGCGAAGTACCACCCCAAGATCAAACGGAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c95ca9d149e9467062c5eaf65bc4064977f97ee17412e226a5bf05162e06eb44
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2954
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The first sequenced Sphaerotilus natans bacteriophage genome is one of a kind - characterization and potential to control this filamentous bacterium in WWTP Ferreira,R., Amado,R., Padrao,J., Ferreira,V., Dias,N.M., Melo,L.D.R., Azeredo,J., Santos,S.B. and Nicolau,A. 2021-02-15 — GenBank