Protein

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Genbank accession
WPK38780.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MAIKNFSISGIGRDVQLGKKGGRLSFTSGVFAFTSDLGGTNYAPVIGGTPLQPEHLATKAYVDSISGGIKPLQSVSVSTQQSYTVDGNNTNPGTGATWAAGVFSDFPRTVDGHVLEMGSRVLVRLEGITITGDTPTVDDAGAARNGIYIVTNVDTENNTVTLDRAPDSDEDNEFIFGSYVLVENGTSAGDGYTLTAQYGGSEVTPPNQMNVDPQFWVKYTSAGATYTAGAGLALSDNEFSLSIPTLSDFTGTAADTLSLAVSNGTTNNKLTVNKLFTDLGVVTALGQTDGVIVKSGSSYVSRTIVADTTGNKLGIAVSNTDGSAGNITVGLDVNGLTAVSSALNDTDVLPIYDGTSNKKVSISQLAAEFTSGFSSNSISQLDSSVVVTDTGSNGTITFTADNTAVATITSAGLTSSNLTASNLTSGRIVLAGTSGHLEDNSALTFSAGILNVGSLTVDSATSTISTTETNGNIIIAPNGTGEVVIQGNGNAEISAELGEQLSLRGDGVIIGNTANTVDYITATETNTIFYSTLANNIAIAGAAASSNPSITALGSDTNLGLNLGVKGTGKIVVTGVTASAYSSGLTDESLVNKLYVDTAVSGASGNITALQTEVNAIETSVGLNTDGTLSAYTGTNYLDSATTIRQATTLLDAQVKTNADDILDKADQTEVDAIETAVGLGTDGTLAPYTGTNYLNSATSIKQATILLDTQIKSNEDDIALKANQTEVDAIETGAGLNTDGTYTADATTNYITTATSLANADKLLDAQIKINTDAIAQLGSAAGSVRTVTLENIPFDTDSSTPIIEGTDLPANGIIINSIIFKVNTAADTAAWATVTHNSVTLASDTTNDPEVAGLYQVDVFSNSVAGQDITLTIAAHGASTGTVTVLLQYTIL
Physico‐chemical
properties
protein length:894 AA
molecular weight: 91190,99840 Da
isoelectric point:4,06412
aromaticity:0,05145
hydropathy:0,03691

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Cassandra
[NCBI] 		3092175 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK38780.1 [NCBI]
Genbank nucleotide accession
OR805292 [NCBI]
CDS location
range 80567 -> 83251
strand +
CDS
ATGGCTATTAAAAATTTTAGCATAAGTGGCATCGGACGCGATGTCCAGCTAGGCAAAAAAGGCGGCCGCCTCTCTTTTACAAGCGGTGTATTTGCATTCACTAGTGACCTGGGCGGTACTAACTATGCACCTGTTATAGGCGGAACACCCCTACAACCAGAACATTTAGCAACTAAAGCATATGTAGATTCTATAAGCGGCGGAATAAAACCACTCCAAAGTGTTTCGGTTTCTACACAACAGTCATATACTGTAGATGGTAATAATACTAATCCGGGAACAGGTGCAACTTGGGCTGCCGGTGTATTTAGTGATTTCCCCAGAACAGTAGACGGACATGTACTGGAAATGGGAAGTCGTGTTTTAGTTAGACTAGAAGGTATAACTATAACAGGCGACACACCTACTGTCGATGATGCTGGCGCAGCTAGAAATGGTATTTATATTGTTACTAACGTAGACACGGAAAACAATACAGTTACATTAGACAGGGCACCAGATTCGGACGAAGATAATGAGTTTATATTTGGCTCATATGTTCTTGTAGAAAACGGTACTTCTGCAGGTGACGGTTATACTTTAACTGCACAATACGGTGGTTCAGAAGTTACTCCTCCTAACCAGATGAACGTTGATCCGCAATTCTGGGTAAAATACACTTCTGCAGGTGCAACATATACTGCCGGCGCTGGCCTAGCGTTGTCGGATAACGAATTTTCGTTAAGTATTCCTACTTTATCGGATTTTACAGGCACTGCTGCTGATACATTATCTCTAGCAGTATCTAACGGTACAACTAATAATAAATTAACAGTAAATAAATTATTTACTGATTTAGGAGTTGTTACTGCGTTAGGACAAACTGATGGTGTTATAGTAAAATCTGGTTCTAGCTATGTAAGCAGAACTATAGTTGCAGATACTACTGGCAATAAACTAGGTATTGCTGTATCTAATACAGACGGTTCTGCAGGAAATATAACAGTAGGGTTAGATGTAAATGGATTAACTGCCGTTTCCTCTGCACTAAACGATACTGATGTCCTCCCAATATACGATGGAACTAGTAATAAAAAGGTTTCTATAAGCCAATTAGCTGCCGAATTTACATCTGGTTTTTCTTCTAATAGTATTTCTCAATTAGATAGTTCTGTTGTAGTAACGGACACAGGATCTAACGGTACAATTACCTTTACTGCCGATAATACTGCTGTTGCTACTATTACTTCTGCAGGTCTTACTTCGTCTAATTTAACTGCAAGTAACTTAACTAGCGGAAGAATAGTACTGGCAGGAACTTCCGGTCATTTAGAAGATAACTCTGCTCTTACTTTTTCTGCAGGTATACTGAATGTAGGATCACTGACTGTAGATAGTGCTACTAGTACAATTTCTACAACAGAAACAAACGGAAACATAATTATTGCGCCAAACGGTACAGGCGAAGTAGTAATACAAGGCAATGGTAATGCAGAAATAAGTGCAGAACTAGGTGAACAACTAAGTCTACGCGGTGACGGTGTTATTATAGGAAACACTGCAAACACAGTAGACTATATTACTGCAACAGAAACTAATACTATATTCTATTCTACATTAGCAAATAATATAGCCATTGCCGGCGCCGCTGCGAGTTCAAACCCGTCTATTACTGCATTAGGTTCAGATACAAACTTAGGTCTAAACTTAGGAGTAAAAGGCACAGGAAAAATTGTTGTTACTGGCGTAACAGCATCTGCATATTCTTCTGGCTTAACTGACGAATCGTTAGTTAACAAACTATATGTAGATACTGCTGTTTCGGGTGCTTCTGGCAACATAACAGCACTACAAACAGAAGTAAATGCCATAGAAACTTCCGTAGGATTGAATACAGACGGAACTCTTTCTGCATATACCGGAACAAACTATTTAGACTCTGCAACTACTATAAGACAGGCTACTACTTTACTTGACGCACAAGTAAAAACTAATGCAGACGATATATTAGATAAAGCAGATCAAACAGAAGTAGATGCTATAGAGACTGCTGTTGGATTAGGAACAGATGGCACACTAGCACCTTATACTGGAACAAATTATTTAAATTCTGCAACTAGTATAAAACAAGCAACTATTTTGCTAGATACACAAATAAAGTCCAACGAAGACGATATAGCACTAAAAGCCAACCAAACAGAAGTAGATGCTATAGAAACAGGCGCTGGGCTTAATACAGACGGTACTTATACTGCCGATGCAACTACTAACTATATAACTACTGCTACAAGTTTAGCTAATGCAGACAAGTTATTAGATGCACAAATTAAAATTAATACCGATGCTATTGCACAATTAGGTTCTGCTGCAGGTTCGGTTCGTACTGTAACATTAGAAAATATTCCATTTGATACTGATAGTTCGACTCCTATAATAGAAGGCACCGATCTACCTGCAAACGGCATTATTATCAATAGTATAATATTTAAAGTAAATACTGCTGCTGATACTGCTGCCTGGGCTACTGTAACTCATAACTCAGTTACACTAGCATCAGACACAACTAATGATCCGGAGGTAGCTGGGTTATATCAAGTTGACGTGTTCTCTAATTCGGTCGCTGGACAAGATATTACTCTAACTATAGCTGCACATGGTGCAAGTACAGGTACTGTTACTGTATTACTCCAATATACAATTCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a4d28ad5be2ec736d796497188672484110cdbdda2f3f0b8708c2447ba290694
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3006
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage Paride can kill dormant, antibiotic-tolerant cells Maffei,E., Harms,A. and Humolli,D. — — GenBank