Protein

Genbank accession
AGH06927.1 [GenBank]
Protein name
fiber protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence Phold
Probability 1,00
Protein sequence
MARQGLLGQAKPAAATNTVLYSAPVDSSASLVLTAASDGGADTYDVAVKEFDQKLTLDAANYLLHQGDVVTGYRFNLASNIPSTAAISPGATLTSGDSEKTAVFESYYIEPFTEVDVKAINIRAVTLNSATGTFVVGETVSKGSAPDTTTALVYAVEEGSGSTTIHIGPSTLNGSGTEFTDSDAITGGTSGATAAVSAGGVGTAQEEFVLSNDGLTFNMYLGVEFTVFDDRAYRFDVSDASMSGRDFSLSTTVNGEWGPDNTAGTADDGAELTTGKTSNGTPGSGGAYVQYDFSAATLTGNLYYYDGGTGTASNANYGGSDRYLTTSTDYSYTGVYVYDVDGTWVNATDSFEANGNSYTVQTQTSEAYGYVRSISGATLEVIKGKNSADFTTSSVFQDAPKDPNASRSAVGVNAVVTATDAIDADMYLRKDNAISDDSSEEVKSLVIGPGQRLLVESTTGNVAFNVVGFEDASSAFTVRTYSSAGGAGGSGSGGGS
Physico‐chemical
properties
protein length:496 AA
molecular weight: 50866,21870 Da
isoelectric point:4,08822
aromaticity:0,09274
hydropathy:-0,17944

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-RIM2 R9_2006
[NCBI] 		869663 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH06927.1 [NCBI]
Genbank nucleotide accession
HQ317291 [NCBI]
CDS location
range 21057 -> 22547
strand +
CDS
ATGGCAAGACAAGGACTTCTTGGACAAGCAAAACCAGCAGCAGCTACCAATACGGTTCTGTACTCTGCACCTGTTGATTCATCGGCAAGTTTGGTACTGACTGCTGCATCAGATGGTGGTGCTGATACTTATGATGTAGCAGTCAAAGAGTTTGATCAAAAACTCACATTAGATGCTGCCAACTATCTTCTGCATCAGGGAGATGTAGTTACTGGTTATCGTTTTAATCTTGCTAGTAATATTCCCTCAACTGCAGCAATCTCCCCTGGTGCAACTCTTACATCTGGCGATAGTGAAAAGACTGCCGTGTTTGAGTCGTATTATATTGAACCTTTCACCGAAGTTGATGTAAAGGCAATCAATATTCGTGCTGTCACATTAAATAGTGCCACTGGTACATTTGTAGTTGGTGAAACTGTCTCAAAAGGATCTGCACCTGACACTACTACTGCACTTGTATATGCAGTTGAGGAAGGTTCGGGTTCTACAACGATTCATATTGGACCTTCTACATTGAATGGTTCGGGTACTGAGTTCACAGACTCTGATGCTATCACTGGTGGTACTTCTGGTGCTACTGCAGCTGTTTCCGCTGGTGGTGTTGGTACAGCACAAGAAGAGTTTGTTCTTTCTAATGATGGTTTAACCTTTAATATGTACCTGGGTGTAGAGTTTACAGTCTTTGATGATAGAGCATATCGTTTTGATGTTTCTGACGCTAGTATGAGTGGCAGAGATTTCAGTCTTTCTACTACTGTTAATGGTGAGTGGGGACCTGACAATACTGCTGGTACTGCCGATGATGGTGCTGAACTTACCACTGGTAAGACAAGCAACGGAACCCCTGGTTCTGGTGGTGCATATGTTCAGTATGATTTTTCTGCAGCAACTTTGACTGGTAACCTTTATTATTATGATGGTGGCACTGGCACTGCAAGTAATGCAAACTATGGTGGTAGTGATAGATATTTGACTACTAGCACTGACTATTCTTACACTGGTGTGTATGTTTATGATGTTGATGGTACTTGGGTAAATGCTACTGATAGTTTTGAAGCAAACGGTAACTCTTATACTGTTCAGACTCAAACTTCTGAAGCATATGGTTACGTCAGAAGCATCAGTGGTGCAACTCTTGAAGTTATTAAGGGTAAAAACTCTGCCGACTTCACAACATCTAGCGTTTTCCAAGATGCTCCCAAAGATCCTAACGCTTCCAGATCTGCTGTTGGTGTAAATGCTGTTGTTACTGCAACAGATGCAATCGATGCTGACATGTATCTGAGAAAAGATAATGCAATCAGTGATGATTCTTCAGAGGAAGTTAAGTCTTTGGTTATTGGTCCTGGTCAACGTCTTCTCGTTGAATCTACAACTGGTAATGTTGCGTTTAACGTAGTTGGATTTGAAGATGCATCCTCTGCATTTACTGTAAGAACCTATAGTTCTGCTGGCGGTGCTGGTGGTAGCGGTTCTGGCGGTGGATCATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
1524ce65247b83d40246a7d67997c20b6191112165104ac1cc1c47427722f463
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4507
Evidence 0,4507
Download PDB

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-RIM2 isolate R9_2006 Henn,M.R., Marston,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2021-02-24 — GenBank