Protein

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Genbank accession
YP_009804599.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MANVIKTVYTYPLDGTTTDFAIPFEYLSRKFVVVTLIGQDRKELVVVTDYRFATRNLISTTKAWGPADNYQQIEIRRYTSASERLVDFSDGSILRATDLNVSQIQTLHVAEEARDLTADTIGVNNDGNLDGRGRRIVNVADGVDAGDVVTVGQMNRWSGSAADSANKAKVSETNAKTSETNSKASELLAQKWAENPKGTPVVSSQYSAKHWALTSEDSANASATSAGNSQAQVANAKAQADRAGGYANDAMGYRDAANTSAQQAAVSEGNAATSASNAKTESDKLIQFNTLVDRINGVAVRQVGEFEVHNSRTYAKPGTVYGDGQLLNRNQFPALVAELLAGRLPVVSDAVWLSDPGKRGCYTLGNGTTTFRVPDLNGVYAGSIKAPVFRGDAGFTVGDVQKSALPNIEGLIALADNELASSASGAFYNAGRSNKGATNDTSGAQLGFDASLWNDVYKKDINEARMNGIVIVWVIRTHGVVNNPGSVDAAVLASRVEQVYTELTNRTLSLENRVKLSQYTPRTLYEGSFGVSQGEIDLGENIINRHLRLHFIPGTGLKSVVGIILPEPGIRIYTQMGSWSQQYDAPSETSIRMLQSSTAGPVQKVEVLELL
Physico‐chemical
properties
protein length:611 AA
molecular weight: 65565,15540 Da
isoelectric point:5,61157
aromaticity:0,07038
hydropathy:-0,29116

Domains

Domains [InterPro]
IPR005604
ATT
1–131
IPR005604 SSF88874
DC_0657
STR
1–595
DC_0657
IPR011049
STR
116–156
IPR011049
YP_009804599.1
1 611
Architecture
ATT
STR
ATT 1-131 | STR 132-595 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage SRT7
[NCBI] 		2268589 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Foetvirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009804599.1 [NCBI]
Genbank nucleotide accession
NC_048002.1 [NCBI]
CDS location
range 3524 -> 5359
strand -
CDS
ATGGCAAACGTCATTAAGACAGTTTATACGTACCCATTAGATGGCACCACGACTGACTTTGCGATTCCCTTTGAGTACCTGTCACGTAAGTTCGTGGTGGTAACGCTCATTGGTCAAGACCGTAAAGAGCTGGTTGTTGTGACCGATTATCGCTTCGCTACCCGCAACCTTATATCTACGACTAAGGCATGGGGCCCAGCCGATAACTATCAACAGATTGAGATTCGTCGATACACTTCTGCAAGTGAACGTCTGGTTGACTTCAGTGATGGTTCCATCCTGCGAGCTACAGACCTTAACGTATCTCAGATTCAGACCCTGCACGTTGCTGAAGAAGCGCGAGACCTGACCGCTGATACCATTGGCGTTAACAACGATGGCAACCTTGATGGTCGTGGTCGTCGTATCGTTAACGTGGCAGATGGTGTGGACGCTGGTGACGTTGTTACCGTAGGCCAGATGAACCGTTGGTCTGGTAGTGCTGCCGACAGCGCCAATAAAGCCAAGGTGTCCGAGACCAACGCCAAGACCTCTGAGACAAACTCAAAGGCTTCCGAGCTGTTAGCCCAGAAGTGGGCTGAGAACCCTAAAGGAACACCTGTGGTCTCCAGTCAGTATTCCGCTAAGCATTGGGCGTTGACCTCTGAGGATAGCGCTAATGCGTCTGCAACCTCTGCGGGTAACTCTCAGGCACAAGTAGCGAACGCTAAGGCACAGGCTGACCGTGCTGGTGGTTACGCCAACGACGCTATGGGTTACCGCGATGCAGCCAACACGTCTGCTCAACAGGCCGCTGTATCTGAGGGCAACGCTGCGACATCTGCAAGTAACGCAAAGACTGAATCCGATAAGCTAATTCAGTTTAACACTCTGGTTGACCGGATTAACGGAGTGGCTGTACGTCAGGTTGGTGAGTTTGAGGTCCACAACTCTCGTACTTACGCTAAGCCGGGTACAGTGTATGGGGACGGTCAACTGCTGAACCGCAACCAGTTCCCTGCACTAGTAGCTGAGTTACTGGCAGGACGCCTCCCGGTTGTCTCTGACGCCGTATGGCTGTCTGACCCCGGTAAACGTGGTTGTTATACCTTAGGTAACGGTACGACCACTTTCCGCGTACCTGACCTCAACGGTGTCTATGCGGGTTCCATTAAGGCTCCTGTGTTCCGTGGTGACGCTGGGTTTACTGTAGGTGACGTTCAGAAGTCAGCTCTACCAAACATTGAGGGTCTGATTGCACTTGCCGATAATGAGCTGGCCTCCAGTGCCTCTGGTGCATTCTACAACGCTGGGCGCTCCAACAAAGGTGCAACTAACGATACCAGTGGTGCTCAGTTAGGTTTCGACGCGTCACTGTGGAACGACGTATACAAGAAGGACATTAATGAAGCCCGTATGAATGGCATCGTGATTGTCTGGGTTATCAGGACTCATGGTGTTGTCAACAATCCGGGTTCGGTGGATGCCGCTGTGTTAGCTTCACGAGTCGAGCAGGTGTATACTGAGCTGACTAACCGCACCCTCTCTCTGGAGAACCGTGTGAAACTCTCCCAATATACTCCACGAACATTGTATGAGGGGTCGTTTGGAGTATCCCAAGGGGAGATTGACCTTGGTGAGAATATTATCAACCGCCACCTGCGACTACACTTCATCCCCGGCACGGGGTTAAAGAGTGTTGTAGGCATAATCCTACCTGAGCCGGGAATCAGAATCTATACACAGATGGGTAGCTGGAGCCAGCAGTATGATGCTCCTTCCGAGACGTCAATTAGGATGCTTCAGTCGAGTACCGCAGGACCGGTACAGAAGGTGGAGGTTCTGGAACTTCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
637351c288e06843273a0716fed35dd8a79ad31e963313087ecc8de091238d7c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7411
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequence of Escherichia coli phage SRT7 Fan,X., Zhao,K., Song,S. and Zhao,Z. 2019-02-14 — GenBank