Protein

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Genbank accession
UXD82424.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYERNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSVMRTNIPMPAGGPGLSSGGEVITTGRNFNELLNGTWEFFSDAIVVASQNAPVYPASAGAAAGMLEAKSWVSGSNTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGATTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWTDVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNSNRAKDFDYRLISEADGSLAFYSRQGSAGPTQDILFNRNSVTFFQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYTPWDSGNFDPSTKLTVNATNQIAGPTGIRNTNGNTGNMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDESNIRTHINTMAARPIWGNVEFWGPWNFNPNTKLTLDAFNDSQYTRMVNSAAKDVGIAAMTSYGDAAMSFFNYEASTPTGNRAAVISFVRNGARGVLFGLDTDNKLKWGGYSLGAVAFEIADSNNLMSLWSSHAAAPNWNGQTIWRSGNFNPDTKATLAARNTTSSPTIFSYGASGIASTGQVGALVVENNSVTNTAAAITFHSPQKYQVNFGLDADNVVKIGGGTMGGVAYPIIHAGNYNNYINQALVQVGLGGVGSYGIFAVLDNAAPTATVQPGVVVDGSILIYSSCAANYNSGQRPAGTWRCMGYVVNRDANTPDSATLFQRVT
Physico‐chemical
properties
protein length:962 AA
molecular weight: 103362,76600 Da
isoelectric point:5,76168
aromaticity:0,10707
hydropathy:-0,24917

Domains

Domains [InterPro]
DC_0009
ATT
1–210
DC_0009 DC_1924
cd19958
STR
152–231
cd19958 DC_1924
DC_1788
STR
167–691
DC_1788
UXD82424.1
1 962
Architecture
ATT
STR
RBD
ATT 1-210 | STR 211-691 | RBD 692-962
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UXD82424.1
1 962
Domain Start End Length (AA) Confidence
N-terminal 1 399 399 0,8795
Central domain 400 605 207 0,3245
C-terminal 606 962 356 0,8023
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-399
Central
400-605
C-terminal
606-962

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Kara-mokiny kep-wari Wadjak 10
[NCBI] 		2979339 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UXD82424.1 [NCBI]
Genbank nucleotide accession
OP310976 [NCBI]
CDS location
range 2784 -> 5672
strand +
CDS
GTGATCACACCCGAACTGATACCCAGTCCGTTTGCTGCGCAGGGCGACAAAGACCCGATCCCGCAGACCTCTTCCACTGGTTTTGCCAACCTTCGCGACGGCTACACGCCGGACTACGAGATCAGCCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGAAAGATTCAAAACCAACTCTTCTTCATCGCGACCCAGAATGCGCAAGCCTGGCAGCGTCAAATGGCGCCGCCGTGGTTTCAGGGTATGCCCGGTGGGTATGAACGGAACGCCGAAGTCGTGCGCGTCGGCAATGACGGAATCATGCGGCGCTATCGCTCCATGGTGAACGCCAACGCCAGCGATCCTCTCAGCAGTACCACCTGGGAAGAGCAACCCGCCTGGTCAGTTATGCGCACCAACATACCGATGCCGGCTGGCGGCCCCGGTCTGTCTTCGGGCGGCGAAGTCATCACCACCGGCCGCAACTTCAATGAATTGCTGAACGGAACCTGGGAATTTTTCTCTGATGCAATCGTCGTGGCCTCTCAGAACGCTCCGGTGTATCCGGCGTCTGCCGGCGCGGCAGCAGGAATGCTGGAGGCGAAATCTTGGGTGTCCGGGTCAAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGATGGCATGATTCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCTACTACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACTGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTCTTCGACGCAGCAGGCGACCGCTGGAGGATTCTGGCAGGCGCGCCGCGCATACAAGTCGGCAACGCCGATCAGGACTACCAGGCGCCGAGTTGGAAGCAAGTTAAAGACTATGTCGCGTCCCAAAAGCTCACCGAAGTGGATTGGACGGATGTCGTCAACAAGCCGAACGTCGCTATCCAAGATACAACGCCGTGGTTCGCCAATCTGGAGCTGTCCGATGCTCGGCCTTTCATCGATTTCCACTTCAACAGCAATCGCGCCAAAGATTTTGACTATCGGCTGATATCTGAAGCAGACGGATCGCTGGCTTTCTATTCGCGGCAGGGGTCTGCTGGGCCTACCCAGGACATCCTGTTCAACCGAAATTCCGTGACTTTCTTCCAGCCGCGACTCGATGTGGCGAAAAACCTCGCGTACATCGCGAACTCTGGCCCCCTTTGGCAGAACACCACCGCCGATCAGCCCGGTTGGAAATTCACCTTTGCACAAGGCGTGGACGCGAACAACAACGCGGTGATCGCAGTCAATACCACCAATCCGGACGGTTCCTATCGTTCACAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCTGGGAACTTCGATCCTTCCACCAAGTTGACGGTGAATGCCACGAACCAAATCGCCGGCCCAACCGGGATTCGGAATACCAACGGCAACACCGGCAACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGCATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCGCTCGGCAATAACTCCTATGTGATCACCGACGAATCCAACATCCGAACCCATATCAACACAATGGCTGCGCGCCCGATTTGGGGGAATGTCGAGTTCTGGGGTCCGTGGAACTTCAATCCGAACACTAAGCTTACGTTGGACGCATTCAACGATAGCCAATACACCAGGATGGTAAACAGCGCCGCGAAGGACGTAGGGATAGCCGCCATGACAAGTTATGGCGACGCGGCTATGTCGTTCTTCAACTATGAGGCTTCGACGCCGACCGGGAATCGTGCTGCTGTAATTTCGTTTGTTCGTAACGGGGCACGAGGCGTTCTGTTCGGCCTGGACACGGACAACAAGCTGAAATGGGGCGGCTATTCTCTAGGTGCCGTCGCGTTCGAGATTGCCGACTCCAACAACCTCATGAGCCTGTGGTCATCCCACGCTGCCGCGCCGAACTGGAACGGGCAGACCATCTGGAGGTCGGGAAACTTCAACCCAGACACCAAGGCGACTTTGGCAGCTCGCAATACGACGTCATCCCCTACAATATTCAGTTATGGGGCGTCCGGAATCGCATCAACCGGACAGGTCGGTGCGTTGGTTGTGGAAAACAACAGCGTCACCAATACCGCAGCCGCCATCACGTTCCATTCGCCGCAGAAATATCAGGTCAACTTCGGCCTGGATGCGGACAACGTGGTAAAGATCGGTGGCGGCACAATGGGCGGCGTAGCATATCCCATCATCCACGCCGGGAACTACAATAACTACATCAACCAGGCGCTGGTTCAGGTGGGTCTTGGCGGAGTCGGTTCCTATGGCATCTTTGCGGTTCTGGACAATGCCGCTCCAACCGCGACCGTTCAACCGGGAGTGGTTGTGGACGGTTCCATTCTCATCTACTCGTCTTGCGCCGCAAACTACAATAGCGGTCAAAGGCCTGCCGGAACTTGGCGCTGCATGGGATATGTAGTCAACCGGGATGCCAACACTCCTGACTCCGCGACCCTTTTCCAGCGAGTGACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1bdca5a12ecc26ce32e80e3aca9efd3f346829bb587f569edbb85ebf8303ee95
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3021
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Four Pseudomonas aeruginosa Bacteriophages: Kara-mokiny 8, Kara-mokiny 13, Kara-mokiny 16 and Boorn-mokiny 1 Vaitekenas,A., Tai,A.S., Ramsay,J.P., Stick,S.M. and Kicic,A. — — GenBank