Protein

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Genbank accession
QAX98807.1 [GenBank]
Protein name
putative structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MANEIGTATNFEDFFSKIVAFLTTNATLVADGQAWQALRVRRDNLDTYTTSLPDSFTGNGRKQIHTFRYDPRSLNTNNPASNSQESFWYTNSGFSAGSSYGQWKLRQAREVKTVRIKAPIGTSYASYAPKSFRLQYSDDGTTWTTALTVSNAPNWSAGERRDFAVPGTPGSHLYWKIIWDATQAVSYIGWQELLLLKADGTVANHFGSEVILKALGNSGLDEIYTGIRAEYDSAAGWYNLFMNGYTGYDANEPSWFNQPGALPGYGAQYTRATPMVPLWNTTMPYWMVASGRSFRFCVKVGTNYEGGYLGFILPYATPNQYPYPLAVGGSLCPINDTSRSAEWRYSYVSYTHGVYPGPGTQNYPESENLWATLYLRSPEGAWNYHGNRSSYGSSNSEGIGGPTVSSSPPYNVGINNAGLRNVWPHCMNGQWSSGLRPYRECLGGGYILQPCVLIQRSPAQVLGELEGTFAISGYQNSAENTTVFNGKTHVVFQNAYRNTIHEHWALSMD
Physico‐chemical
properties
protein length:509 AA
molecular weight: 56444,84250 Da
isoelectric point:6,76005
aromaticity:0,14145
hydropathy:-0,44853

Domains

Domains [InterPro]
DC_0072
STR
1–509
DC_0072
G3DSA:2.60.120.260
STR
69–183
G3DSA:2.60.120.260
IPR008979
STR
80–152
IPR008979
PF22633
RBD
84–163
PF22633
QAX98807.1
1 509
Architecture
STR
STR 1-509
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QAX98807.1
1 509
Domain Start End Length (AA) Confidence
N-terminal 1 45 45 0,1622
Central domain 46 244 200 0,7250
C-terminal 245 509 264 0,9735
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-45
Central
46-244
C-terminal
245-509

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PaTs-2
[NCBI] 		2419751 No lineage information
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QAX98807.1 [NCBI]
Genbank nucleotide accession
MH791403 [NCBI]
CDS location
range 60066 -> 61595
strand -
CDS
ATGGCAAACGAAATCGGAACCGCGACGAACTTTGAGGACTTCTTCAGCAAGATCGTCGCCTTTCTTACCACGAACGCGACCCTGGTGGCGGATGGTCAGGCTTGGCAGGCGCTGCGCGTCCGCCGGGATAATCTTGACACGTACACCACCAGCCTCCCGGACTCCTTCACGGGTAACGGTCGGAAACAAATTCACACATTCCGCTATGATCCGCGGTCGCTGAACACGAACAATCCCGCCTCGAACAGTCAGGAGTCCTTCTGGTACACCAACTCAGGCTTCTCCGCCGGGAGCAGCTATGGTCAATGGAAACTGCGACAGGCGCGCGAAGTCAAGACCGTGCGCATCAAGGCCCCCATCGGGACCAGCTACGCGAGCTATGCCCCCAAGTCCTTCCGGCTCCAATACTCGGATGACGGAACCACCTGGACTACGGCCCTGACCGTCTCGAACGCGCCGAACTGGTCCGCCGGGGAGCGGCGGGACTTCGCTGTGCCCGGCACCCCCGGTTCGCACCTGTATTGGAAGATCATCTGGGACGCGACTCAGGCGGTGAGCTACATCGGGTGGCAGGAACTCCTCCTGCTCAAAGCGGACGGGACGGTGGCCAACCACTTTGGGTCGGAGGTCATCCTAAAGGCCCTGGGCAACTCGGGCCTGGACGAAATCTACACCGGCATCCGGGCGGAGTACGACAGCGCAGCGGGTTGGTACAACCTGTTCATGAACGGATACACGGGCTATGACGCCAACGAGCCTTCCTGGTTCAATCAACCGGGAGCCCTCCCGGGCTACGGGGCGCAATACACTCGGGCAACCCCGATGGTCCCGCTGTGGAACACCACCATGCCGTACTGGATGGTGGCTTCGGGCCGTTCCTTCCGGTTCTGTGTCAAGGTCGGCACGAACTATGAGGGAGGCTATCTTGGTTTCATCCTCCCGTATGCTACGCCCAATCAATACCCATACCCGCTCGCAGTCGGGGGTTCGCTCTGCCCCATCAACGACACCTCCCGGTCCGCGGAGTGGCGTTATTCATACGTGAGCTACACCCACGGCGTGTACCCAGGGCCGGGCACTCAGAACTACCCGGAAAGCGAGAACCTGTGGGCAACCCTTTACCTGCGCAGCCCGGAAGGAGCGTGGAACTACCACGGCAACCGTTCGTCCTACGGTTCGTCCAACTCCGAAGGCATAGGTGGTCCGACCGTTAGCAGCTCGCCTCCATACAACGTCGGCATCAACAACGCCGGTTTGCGCAACGTCTGGCCTCACTGCATGAACGGCCAGTGGTCCTCGGGCCTGCGCCCCTACCGCGAGTGCTTGGGCGGCGGGTATATTCTCCAGCCTTGCGTGCTGATTCAGCGGTCGCCTGCTCAAGTCCTCGGGGAGCTGGAGGGGACGTTTGCAATCAGCGGGTACCAAAACAGCGCGGAGAACACGACCGTGTTCAACGGCAAGACTCACGTGGTGTTCCAGAATGCTTACCGCAACACGATCCACGAGCACTGGGCGCTGTCGATGGATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
2add698e57eb06f9e19aa130915748fce80f9465938626c0c9ed5f66274861b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6578
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
PaTs-2, Complete genome sequences of 3 novel enterobacteria, Pakpunavirus like phages Yuan,S., Ma,Y. and Liu,Q. 2020-07-27 — GenBank