Protein

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Genbank accession
YP_009273610.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTVNPAPWIEIDGDRITCQPDPTRLVILDDIVIDWGRDHPLADRGVPAAQFRLWDPTGQLLAQAGTAVDMGSTSQTLGRSVVIGWTVGTTTRVIFRGTVSGFDVRRDNKRRGWLVEGTATDRTTDLGSGKLADNVATWPAETAIVRANRLKAAIADANIDITQVYFEPDAVSWEMGLTKVADKNVLQLLDEFYASFGLTWDYRPDENVTRPAPMRSRYDARFYRLLYRIPGTGDYTICSPPETQTGFGDDAATYVSTVVSGCAVSIEGAMNVDRRDRINRVVITYLKANGVEQETSGGWGSSSLTNPRITKVSTWLNLDAPNNGHTEKIYRNQWSQVASSYVPRMPRVIWDTDHFLGVEQAFTLTRCSQSWSTVSITSNPYAAALKVPSEFHIIGGTVRYFDGRWTVAMVPAWHPNLRTRVATTWVDLRTGNPVWASLSWNSPAARPAADIAWSDFMNIAVTNQPNPAQEVQ
Physico‐chemical
properties
protein length:472 AA
molecular weight: 52349,16480 Da
isoelectric point:5,83665
aromaticity:0,09534
hydropathy:-0,29174

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009273610.1
1 472
Domain Start End Length (AA) Confidence
N-terminal 1 190 190 0,5483
Central domain 191 389 200 0,0996
C-terminal 390 472 82 0,4273
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-190
Central
191-389
C-terminal
390-472

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage GMA5
[NCBI] 		1647472 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Gordonia malaquae
[NCBI] 		410332 cellular organisms > Bacteria > Bacillati > Actinomycetota > Actinomycetes > Mycobacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009273610.1 [NCBI]
Genbank nucleotide accession
NC_030907 [NCBI]
CDS location
range 9999 -> 11417
strand +
CDS
ATGACCGTCAACCCCGCCCCCTGGATCGAGATTGACGGCGACCGCATCACCTGCCAACCCGACCCGACACGCCTGGTCATCCTCGACGACATCGTGATCGACTGGGGCCGCGACCACCCGCTCGCCGATCGCGGAGTCCCTGCAGCTCAGTTCCGACTTTGGGACCCCACCGGCCAACTGCTCGCGCAGGCTGGCACCGCCGTCGACATGGGATCGACCTCACAGACACTCGGAAGGTCAGTCGTCATCGGATGGACTGTCGGCACGACGACACGGGTCATATTCCGAGGAACAGTTTCCGGCTTCGATGTCCGGCGCGACAACAAGCGCCGAGGCTGGCTCGTCGAGGGCACGGCGACCGACAGGACGACCGACCTCGGAAGCGGCAAGCTCGCCGACAACGTCGCCACCTGGCCGGCCGAAACTGCGATTGTCCGAGCCAACCGGCTCAAAGCGGCGATCGCCGACGCAAATATAGACATCACCCAGGTCTACTTTGAACCCGACGCGGTGAGCTGGGAGATGGGGCTTACCAAGGTCGCCGACAAAAACGTCCTGCAACTGCTCGATGAGTTCTACGCATCATTCGGTCTTACCTGGGACTACCGGCCCGACGAGAATGTAACTCGCCCTGCTCCGATGCGCTCGCGCTACGATGCCCGATTCTACCGGCTCTTATACCGCATCCCTGGAACAGGGGACTACACGATATGCAGTCCGCCGGAAACGCAAACCGGATTCGGCGACGACGCCGCGACGTACGTCTCGACTGTTGTATCAGGTTGCGCCGTGTCGATCGAGGGGGCAATGAACGTCGATCGACGCGACAGAATCAATCGCGTCGTGATCACGTACCTGAAAGCGAACGGCGTCGAACAGGAAACATCGGGCGGATGGGGTTCGAGTAGCCTCACGAACCCGCGCATCACAAAAGTGTCCACCTGGCTCAATCTCGATGCTCCGAACAACGGACACACCGAGAAGATATACCGCAACCAGTGGAGTCAGGTTGCGTCGTCATACGTACCTCGAATGCCTCGCGTGATCTGGGACACCGACCATTTCCTTGGCGTCGAGCAGGCATTCACCCTGACCCGATGCTCTCAGTCATGGTCCACGGTCTCTATCACCTCTAACCCGTATGCCGCCGCATTAAAGGTGCCGAGTGAGTTTCACATCATCGGCGGAACTGTCCGCTACTTCGACGGCCGGTGGACCGTTGCCATGGTTCCCGCCTGGCATCCCAATCTTCGGACTCGCGTCGCCACTACGTGGGTCGATCTACGCACCGGTAACCCGGTATGGGCGAGCTTGTCGTGGAACTCCCCGGCGGCGCGACCCGCAGCCGACATCGCATGGTCGGACTTCATGAACATCGCCGTCACCAATCAGCCGAACCCCGCACAGGAGGTGCAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
f50f2f04ba9c9b55a11bd8f0d5affb53f8f623d455b1a4986b9980d636b21dea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6359
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50