Protein

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Genbank accession
QZI86162.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRYTPTSPRSVPEIRAELDKIAEAIDTMLDREGDGPNQMEAPLDMNGQPILNADLSETAVKVLAQKEEFILASGQTTINTTLSTDTAVFYVNGASTDNGRMFEGIDYTVTSTNQIELTVPYPVGTALLMTFTDLENASNLIDGGVY
Physico‐chemical
properties
protein length:146 AA
molecular weight: 15827,48690 Da
isoelectric point:4,05003
aromaticity:0,06164
hydropathy:-0,20959

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 172P1
[NCBI] 		2859291 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86162.1 [NCBI]
Genbank nucleotide accession
MW865292.1 [NCBI]
CDS location
range 17944 -> 18384
strand +
CDS
ATGCGATACACACCCACAAGTCCTCGGTCAGTTCCTGAGATTAGGGCAGAACTAGATAAGATTGCTGAAGCGATAGATACCATGCTAGACCGAGAAGGTGATGGCCCTAACCAGATGGAAGCCCCTCTGGATATGAATGGTCAGCCTATCTTGAATGCCGATTTATCAGAGACTGCCGTTAAAGTGTTGGCTCAGAAAGAAGAGTTTATACTTGCATCAGGTCAGACCACGATTAACACCACACTATCTACAGATACCGCCGTGTTTTATGTCAACGGTGCATCCACAGATAACGGCAGAATGTTTGAAGGAATAGATTACACTGTCACCAGTACTAATCAGATTGAACTAACCGTACCCTACCCTGTAGGTACTGCACTGTTGATGACTTTTACCGATTTAGAGAATGCATCTAATTTAATTGATGGAGGGGTTTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
ef21add3bf08db31539790929bbd9b34445a2b695aecc7b6fe02d079ab86b117
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8257
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank