Protein

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Genbank accession
ANH50492.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MALNFTTITENNVIRDLTTQVNNIGEELTKERNIFDITDDLVYNFNKSQKIKLTDDKGLTKSYGNITALRDIKEPGYYYIGARTLATLLDKPDMESIDVVLHVVPLDTSSKVVQHLYTLSTNNNQIKTLYRFVSGSSSSEWQFIQGLPSNKNAVITGTNILDISSPGVYFVMGMTGGMPSGVDSGFLDLSVDSNDNRLARLTDSETGKEYTSIKKPTGVYTDWKKEFEPIDMQKYILNDISDGSTKFNLLVYKSEGISFEEAIRNHIQKTGQTTFSFYSQNGVPGSPLPNSCRGLYLSDVTDVSNLHGIYYAIGTDGRFATGAVSSGSWSTPKTTPSYKELWTGAQSFLSIGATKNLSDDISNYSYVEVYTKHKTVEKTKGNDDSGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPVTEFYRVGINFSGTTWKIVDSAVQSSKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:457 AA
molecular weight: 50530,89730 Da
isoelectric point:5,63640
aromaticity:0,10284
hydropathy:-0,38490

Domains

Domains [InterPro]
DC_1773
STR
7–246
DC_1773 IPR057110
DC_0448
STR
195–456
DC_0448
ANH50492.1
1 457
Architecture
STR
STR 7-457
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ANH50492.1
1 457
Domain Start End Length (AA) Confidence
N-terminal 1 216 216 0,7644
Central domain 217 415 200 0,0943
C-terminal 416 457 41 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-216
Central
217-415
C-terminal
416-457

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage pSco-10
[NCBI] 		1837829 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus cohnii
[NCBI] 		29382 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ANH50492.1 [NCBI]
Genbank nucleotide accession
KX011028.1 [NCBI]
CDS location
range 52044 -> 53417
strand -
CDS
ATGGCATTAAATTTTACTACAATAACGGAAAACAATGTTATTAGAGACCTGACTACTCAGGTCAATAACATTGGAGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACAGATGATTTAGTTTATAATTTTAATAAATCACAGAAAATTAAACTAACTGATGATAAGGGATTAACTAAATCTTATGGAAACATAACAGCTCTTAGAGATATAAAAGAACCTGGTTACTATTATATCGGAGCTAGAACATTAGCAACATTATTAGATAAGCCTGACATGGAGTCTATTGATGTTGTATTACATGTAGTACCACTTGATACTTCTAGTAAAGTAGTTCAACATTTATACACATTATCTACTAACAATAATCAAATTAAAACGTTATATAGATTTGTCTCAGGAAGCTCTAGTTCAGAATGGCAATTTATTCAAGGATTACCTAGTAATAAAAATGCTGTTATAACAGGTACTAATATTTTAGATATATCTTCACCAGGTGTTTATTTTGTTATGGGAATGACAGGAGGTATGCCTAGTGGTGTAGATTCAGGTTTTTTAGATTTAAGTGTAGATTCTAATGACAATAGACTAGCTAGGTTAACTGACTCTGAAACTGGTAAAGAGTACACTAGTATTAAGAAACCTACAGGAGTATACACAGACTGGAAAAAAGAATTTGAACCTATTGATATGCAGAAATATATACTAAATGATATTTCTGATGGAAGTACGAAATTTAATCTACTCGTTTATAAGTCTGAAGGAATATCATTTGAAGAGGCTATAAGGAATCATATACAGAAAACAGGACAAACAACCTTTAGTTTTTATTCTCAGAATGGGGTACCTGGTTCCCCATTACCAAATAGTTGTAGAGGTCTATATTTATCTGATGTTACAGATGTAAGTAACCTTCATGGTATATATTATGCTATAGGTACAGATGGTAGGTTTGCTACTGGAGCTGTTAGTAGTGGTTCTTGGTCTACACCAAAAACTACACCATCTTACAAAGAATTATGGACTGGAGCACAATCATTCTTATCTATAGGAGCCACTAAGAATCTCTCAGATGACATTAGTAATTATTCTTATGTAGAGGTTTATACTAAACATAAGACAGTAGAGAAGACTAAAGGTAATGATGATTCAGGTACAATTTGTCATAAATTCTACTTGGATGGTAGTGGTACCTACGTTTGCTCAGGAACTTTTGTTTCAGGAGATAGAACAGATACAAAACCACCTGTTACAGAATTTTATAGAGTAGGTATCAACTTCTCAGGAACAACTTGGAAAATTGTAGACAGTGCAGTACAGAGCAGTAAAACACAATACGTTACAAGAATTATAGGTATTAATATGCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
780fca72ea74f90c22175acd463f13031bd85b95cbc4c4bf3f1b9d2351d12a4b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8128
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and complete genome sequence of the Staphylococcus bacteriophage pSco-10 Jun,J.W. and Park,S.C. 2017-11-22 — GenBank