Protein
View in Explore- Genbank accession
- AGV99418.1 [GenBank]
- Protein name
- minor structural protein
- RBP type
-
TSP
- Protein sequence
-
MPQEMPASFRNDFQPGDTYTVALDVWTETANNKIAVGLHHFIEGNNSMGFHSGGTPELTINPVKKWVRVHATMKLHDKSEMKKGFSLYVYGDRSADGSECYFKNVSVLKGSMPKAFAPSPEDGVKETSFNQKVTEITKDADGIKSNVKDLTELTTKHGQQITSSETQMKQLSDEISAKMTSKQVEDYVAGVGMTNVLRNADLKTGLKTPYFGVTPGTTITDSKYRSFNTFWSDKTGRTADDWQGAISNRYPCQGGEDFVGSCWFATDNPGSIDNGAYMELEQWNSAGTRIKTDRIQLKAQQTWQRAELTMKTEATTVSVTWRYYVQRNGRLRVGMPMLQRGKVASEFQVNPADIADVDALREDIATRIATEEFNKVVTQINREIKANKEGIEIKADANKVYTKQEADGTFAKESHVKTLEAKILVNERNISLSVKENDIISKINMSKETISIEARRINLIGFVTAQHIKGSVLEGVRIKTAPSGKQRWVELNEQHINLYDKGVNRMYYGFYDTGNDVQPTVVLGKGSVGDLLGAMVFHQTTPGGNDFGKSFGRVGMVHRTENGNLLMNASIEFQRDGGHLLHHCWGNMQFRSNTLMRMETNGALDLLTNWTDVASNINMVATRNLDVMAHNQVWMRSNQAQWYQSGNGTFEFGKNGSNHMGITFNVNNPNDADIKFGTDIVLRSSNASGYTGNMQVKNYNGTAFRDLEVRDVKHYGRISQVSQGKLKTGVKDVKFDSLEKIMALDLKSFYMKTEIERLYEMRANREPGSPVPTYADINISYGFIVEKTDPVFQVPKGDAMDMYAISAIHIDATQNINRRLVVAERVIETQNDTIKTQNDRISNLETMLEQVLELLGKE
- Physico‐chemical
properties -
protein length: 858 AA molecular weight: 96145,28100 Da isoelectric point: 6,83849 aromaticity: 0,08159 hydropathy: -0,54242
Domains
Domains [InterPro]
DC_1964
STR
5–120
STR
5–120
G3DSA:2.60.120.260
STR
191–333
STR
191–333
Coil
Unmapped
827–854
Unmapped
827–854
1
858
Architecture
STR 5-120 | STR 158-510 | RBD 564-858
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
858
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 10 | 10 | 0,0426 |
| Central domain | 11 | 249 | 240 | 0,4423 |
| C-terminal | 250 | 858 | 608 | 0,4517 |
Note: Constraints were applied during segmentation.
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues
Sequence started with non-N-terminal domain|N-terminal too short, forced to 10 residues
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-10
1-10
Central
11-249
11-249
C-terminal
250-858
250-858
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage proCM3 [NCBI] |
1357712 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Bacillus thuringiensis [NCBI] |
1428 | cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
AGV99418.1
[NCBI]
Genbank nucleotide accession
KF296717
[NCBI]
CDS location
range 34974 -> 37550
strand +
strand +
CDS
ATGCCACAAGAAATGCCAGCTAGTTTCCGAAACGATTTCCAACCAGGTGATACATACACAGTCGCCTTAGATGTTTGGACAGAAACGGCGAACAACAAAATAGCGGTAGGATTACACCACTTCATCGAGGGTAACAATTCAATGGGCTTTCATAGTGGAGGTACGCCAGAATTGACGATCAACCCTGTTAAAAAGTGGGTTCGTGTTCATGCAACAATGAAATTACATGATAAATCAGAAATGAAAAAAGGATTTAGTTTGTATGTTTATGGTGATCGTTCTGCTGATGGTAGTGAGTGCTACTTCAAAAATGTATCCGTGTTAAAAGGATCAATGCCAAAAGCGTTTGCGCCTTCACCAGAAGACGGAGTGAAAGAAACGTCATTCAATCAGAAAGTGACAGAGATCACGAAAGACGCTGACGGGATTAAGTCAAACGTGAAAGACCTTACAGAGTTAACAACTAAACATGGCCAACAGATCACAAGTTCAGAAACACAAATGAAACAATTGTCTGACGAAATAAGCGCAAAAATGACATCTAAACAGGTAGAAGATTATGTTGCTGGTGTTGGCATGACAAATGTTTTACGTAACGCCGATTTAAAAACAGGTCTGAAGACACCTTATTTTGGAGTTACACCAGGGACAACGATTACAGATTCTAAGTACAGGTCTTTCAATACATTCTGGAGCGATAAAACGGGGCGAACTGCTGATGATTGGCAAGGTGCTATTTCTAATAGATACCCGTGTCAAGGTGGTGAAGATTTTGTTGGTTCATGTTGGTTCGCTACTGATAACCCTGGATCAATTGATAACGGCGCTTACATGGAGTTAGAACAATGGAACAGCGCTGGAACAAGAATAAAAACAGATAGAATCCAATTAAAAGCACAACAAACATGGCAAAGAGCGGAATTAACCATGAAAACAGAAGCTACAACAGTAAGCGTAACATGGAGATACTATGTTCAAAGGAATGGCCGTTTGCGTGTCGGTATGCCTATGTTACAGCGTGGTAAGGTTGCTAGTGAATTCCAGGTCAACCCTGCTGACATTGCTGACGTTGATGCTTTAAGAGAAGATATTGCAACTCGTATCGCAACAGAAGAGTTTAACAAAGTTGTTACCCAGATCAACAGAGAGATCAAGGCAAACAAAGAAGGAATTGAAATAAAAGCTGACGCGAACAAGGTATACACGAAACAAGAAGCCGATGGAACATTTGCCAAAGAATCGCACGTAAAAACGTTAGAAGCTAAAATTCTAGTGAACGAAAGAAATATTAGTCTATCAGTAAAAGAGAATGATATTATTTCAAAGATCAACATGTCTAAAGAAACAATTTCGATTGAAGCTAGACGAATTAATTTGATCGGTTTTGTTACGGCCCAACATATTAAAGGGTCTGTTTTAGAAGGTGTACGCATCAAAACAGCGCCGTCTGGAAAACAAAGATGGGTTGAATTGAATGAACAGCATATCAATTTGTATGACAAAGGCGTTAACCGCATGTACTACGGTTTTTATGATACTGGTAATGATGTGCAACCTACCGTTGTACTTGGTAAGGGTTCTGTAGGTGATTTATTGGGCGCTATGGTATTCCATCAAACAACGCCAGGTGGTAATGATTTCGGTAAATCGTTTGGTCGCGTAGGTATGGTTCATCGTACAGAGAATGGAAATCTATTAATGAATGCCTCTATCGAATTCCAGCGCGACGGTGGTCACTTATTACACCACTGTTGGGGTAATATGCAATTTAGAAGTAATACACTTATGAGAATGGAGACAAATGGGGCTTTAGACTTACTGACAAACTGGACAGATGTCGCTAGTAATATAAATATGGTTGCTACAAGAAACCTTGATGTTATGGCACATAATCAAGTGTGGATGAGATCAAACCAGGCTCAATGGTATCAATCCGGTAACGGAACGTTTGAATTCGGTAAAAATGGTTCTAATCACATGGGTATTACATTTAACGTGAACAACCCTAATGACGCCGATATAAAGTTTGGTACAGATATTGTATTAAGGTCTTCTAATGCGTCTGGATACACTGGTAACATGCAAGTTAAAAATTACAATGGTACAGCGTTCCGCGACCTGGAAGTAAGGGACGTAAAACACTATGGTCGTATAAGCCAGGTATCACAAGGTAAATTAAAAACAGGTGTCAAAGATGTTAAATTTGATTCTTTAGAAAAGATTATGGCCCTTGATCTGAAATCATTCTATATGAAAACAGAGATTGAAAGATTGTATGAAATGAGAGCCAACAGAGAACCAGGATCGCCAGTACCGACTTATGCTGACATAAATATTAGTTACGGTTTCATTGTTGAGAAGACAGACCCAGTATTCCAAGTCCCTAAAGGTGACGCAATGGATATGTATGCCATTTCAGCGATACACATTGACGCAACTCAAAACATTAACCGTCGTTTAGTGGTGGCTGAAAGAGTTATAGAAACTCAAAATGACACTATCAAAACTCAAAACGATAGAATTTCCAATCTAGAAACTATGTTGGAACAGGTGTTAGAATTACTAGGAAAGGAATGA
Genome Context
Genome Context
Tertiary structure
PDB ID
d02334db6c9a265ad7d4842c30c38417ea499f55de981dad50b55db4512bf74a
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50