Protein

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Genbank accession
YAO57848.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MYKIKDVETRIKNDGVDLGDIGCRFYTEDENTASIRIGINDKQGRIDLKAHGLTPRLYLFMEDGSIFKNEPLIIDDVVKGFLTYNIPKKVIKHAGYVRCKLFLEKEEEKIHVANFSFNIVDSGIESAVAKEIDVKLVDDAITRILKDNATDLLSKDFKEKIDKDVIS
Physico‐chemical
properties
protein length:167 AA
molecular weight: 18996,61490 Da
isoelectric point:5,47311
aromaticity:0,07784
hydropathy:-0,29641

Domains

Domains [InterPro]
DC_0885
STR
1–167
DC_0885
IPR018913
ATT
4–141
IPR018913
G3DSA:2.60.40.3350
ATT
11–125
G3DSA:2.60.40.3350
YAO57848.1
1 167
Architecture
ATT
STR
ATT 1-141 | STR 142-167
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage EMS30
[NCBI] 		3463358 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAO57848.1 [NCBI]
Genbank nucleotide accession
PX270300.1 [NCBI]
CDS location
range 21201 -> 21704
strand +
CDS
ATGTACAAAATAAAAGATGTTGAAACGAGAATAAAAAATGATGGTGTTGACTTAGGTGACATTGGCTGTCGATTTTACACTGAAGATGAAAATACAGCATCTATAAGAATAGGTATCAATGACAAACAAGGTCGTATCGATCTAAAAGCACATGGCTTAACACCTAGATTGTATTTGTTTATGGAAGATGGCTCTATATTCAAAAATGAACCTCTTATTATCGACGATGTTGTAAAAGGGTTCCTTACCTACAATATACCTAAAAAGGTTATCAAACACGCTGGTTATGTTCGTTGTAAGCTGTTTTTAGAGAAAGAAGAAGAAAAAATACATGTCGCGAACTTTTCTTTCAATATCGTTGATAGTGGTATTGAATCTGCTGTAGCAAAAGAAATCGATGTTAAATTGGTAGATGATGCTATTACGAGAATCTTAAAAGATAACGCGACAGATTTATTGAGCAAAGACTTTAAAGAGAAAATAGATAAAGATGTCATTTCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
58e991be95a06b3c1d34bae8d8a470a5436bbd963f5c5df6945fde57b766b937
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7053
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Evaluation of therapeutic efficacy of phages obtained from milk of cows with mastitis Dalgic,C., Tasdurmazli,S., Erdogdu,B. and Ozbek,T. 2003-09-01 — GenBank