Protein

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Genbank accession
CAX63155.1 [GenBank]
Protein name
putative tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
Protein sequence
MSYKQSAYPNLLMGVSQQVPFERLPGQLSEQINMVSDPVSGLRRRSGIELMAHLLHTDQPWPRPFLYHTNLGGRSIAMLVAQHRGELYLFDERDGRLLMGQPLVHDYLKAADYRQLRAATVADDLFIANLSVKPEADRTDVKGVDPNKAGWLYIKAGQYSKAFSMTIKVKDNATGTTYSHTATYVTPDNASTNPNLAEAPFQTSVGYIAWQLYGKFFGAPEYTLPNSTKKYPKVDPDTAAATVAGYLNQRGVQDGYIAFRGDGDIVVEVSTDMGNNYGIASGGMSLNATADLPALLPGAGTPGTGVQFMDGAVMATGSTKAPVYFEWDSANRRWAERAAYGTDWVLKKMPLALRWDEATDTYSLNELDYDRRGSGDEDTNPTFNFVTRGITGMTTFQGRLVLLSQEYVCMSASNNPHRWFKKSAAALNDDDPIEIAAQGSLTEPYEHAVTFNKDLIVFAKKYQAVVPGGGIVTPRTAVISITTQYDLDTRAAPAVTGRSVYFAAERALGFMGLHEMAPSPSTDSHYVAEDVTSHIPSYMPGPAEYIQAAASSGYLVFGTSTADEMICHQYLWQGNEKVQNAFHRWTLRHQIIGTYFTGDNLMVLIQKGQEIALGRMHLNSLPAREGLQYPKYDYWRRIEATVEGELELTKQHWDLIKDAPAVYQLQPVAGAFMERYQLGVKRETNTKVFLDVPEAVVGSVYVVGCEFWSKVEFTPPVLRDHNGLPMTSARAVLHRYNVNFGWTGEFLWRISDTARPNQPWYDTTPLRLFSRQLNAGEPLVDSAVVPLPARVAMATSKFELSCHSPYDMNVRAVEYNFKSNQTYRRV
Physico‐chemical
properties
protein length:826 AA
molecular weight: 91933,70790 Da
isoelectric point:6,05394
aromaticity:0,10896
hydropathy:-0,32337

Domains

Domains [InterPro]
IPR058003
TTP
1–817
IPR058003
DC_0058
STR
1–826
DC_0058
CAX63155.1
1 826
Architecture
STR
STR 1-826
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAX63155.1
1 826
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9921
Central domain 141 339 200 0,2716
C-terminal 340 826 486 0,3177
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-826

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage phikF77
[NCBI] 		627480 Uroviricota > Caudoviricetes > Autographivirales > Krylovirinae > Phikmvvirus
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAX63155.1 [NCBI]
Genbank nucleotide accession
FN263372 [NCBI]
CDS location
range 26366 -> 28846
strand +
CDS
ATGAGCTACAAGCAATCCGCGTACCCCAACCTGCTGATGGGCGTGAGCCAGCAGGTGCCGTTCGAGCGCCTGCCAGGGCAGCTCAGCGAGCAGATCAACATGGTGTCGGACCCCGTGTCCGGCCTTCGCCGCCGTAGCGGTATCGAGCTGATGGCGCACCTGCTGCACACTGACCAGCCCTGGCCGAGGCCGTTCCTGTACCACACCAACCTGGGCGGTCGCAGCATTGCGATGCTGGTGGCGCAGCACCGGGGCGAGCTATACCTGTTCGACGAGCGGGATGGCCGCCTGCTGATGGGGCAGCCCCTGGTCCACGACTACCTCAAAGCCGCCGACTACCGGCAGCTTCGCGCCGCCACGGTGGCTGATGACCTGTTCATCGCCAACCTGAGCGTGAAGCCGGAAGCCGACCGCACTGACGTGAAGGGCGTGGACCCCAATAAGGCGGGCTGGCTCTACATCAAGGCGGGTCAGTATTCGAAGGCGTTCTCCATGACCATCAAGGTCAAGGACAATGCCACCGGTACGACCTACAGCCACACGGCCACCTACGTGACGCCGGACAACGCCAGCACCAACCCCAACCTCGCCGAGGCCCCGTTCCAGACGAGCGTGGGCTACATCGCGTGGCAGCTCTACGGCAAGTTCTTCGGCGCCCCGGAGTACACCCTGCCCAACTCCACGAAGAAGTACCCCAAGGTTGACCCCGACACGGCTGCGGCTACGGTAGCCGGCTATCTCAACCAGCGGGGCGTGCAGGACGGCTACATCGCCTTCCGGGGCGACGGGGACATCGTGGTCGAGGTGTCTACCGATATGGGCAACAACTACGGCATCGCCTCGGGTGGCATGAGCCTCAACGCCACCGCAGACCTACCGGCCCTACTGCCGGGTGCGGGTACGCCGGGCACTGGCGTGCAGTTCATGGACGGGGCCGTCATGGCCACTGGCTCGACCAAGGCGCCAGTCTACTTCGAGTGGGATTCGGCGAACCGCCGCTGGGCGGAGCGCGCAGCCTACGGGACCGATTGGGTCTTGAAGAAGATGCCCTTGGCCCTACGCTGGGACGAGGCGACCGACACCTACAGCTTGAACGAGCTGGACTACGACCGGCGCGGCTCCGGCGACGAGGACACGAACCCCACGTTCAACTTCGTCACCCGGGGCATCACCGGCATGACGACCTTCCAGGGCCGGCTGGTCCTCCTGTCTCAGGAGTACGTCTGTATGTCGGCGAGCAACAACCCGCACCGCTGGTTCAAGAAGTCGGCGGCGGCGCTCAACGACGATGACCCCATCGAGATCGCGGCCCAGGGCAGCCTGACCGAGCCGTACGAGCACGCAGTCACCTTCAACAAGGACTTGATCGTCTTCGCCAAGAAGTATCAGGCCGTGGTCCCTGGCGGCGGTATCGTGACCCCGCGAACGGCGGTCATCAGCATTACCACGCAGTACGACCTCGATACCCGAGCGGCACCCGCCGTCACAGGCCGTAGCGTGTACTTCGCCGCTGAGCGTGCCCTGGGCTTCATGGGCCTGCACGAGATGGCCCCGTCGCCATCCACGGACAGCCACTACGTCGCCGAGGACGTTACCAGCCACATCCCGAGCTACATGCCAGGGCCGGCAGAGTACATCCAAGCGGCGGCCTCAAGCGGCTACCTCGTGTTCGGCACCAGTACGGCGGACGAGATGATTTGCCACCAGTACCTGTGGCAGGGCAACGAGAAAGTGCAGAACGCATTCCACCGCTGGACGCTACGGCACCAGATCATCGGGACCTACTTCACCGGGGACAACCTGATGGTCCTGATCCAGAAGGGTCAGGAGATAGCCCTGGGCCGGATGCACCTGAACAGCCTGCCTGCACGGGAGGGCCTGCAATATCCGAAGTACGACTACTGGCGGCGTATCGAAGCGACTGTCGAGGGCGAGCTGGAGCTGACCAAGCAGCATTGGGACCTGATCAAGGACGCCCCTGCCGTGTACCAGCTACAGCCCGTGGCCGGCGCATTCATGGAGCGCTACCAGCTCGGCGTGAAGCGCGAGACCAACACCAAGGTGTTCCTCGACGTTCCCGAGGCCGTTGTCGGCTCGGTCTACGTGGTTGGCTGCGAGTTCTGGTCCAAGGTGGAGTTCACCCCGCCAGTGCTGCGGGACCACAACGGCCTGCCGATGACCTCGGCCCGTGCAGTGCTGCACCGCTACAACGTCAACTTCGGATGGACCGGAGAGTTCCTGTGGCGCATCAGCGACACGGCCCGGCCCAACCAGCCGTGGTACGACACGACGCCTCTACGGCTGTTCAGCCGGCAACTCAACGCCGGCGAGCCGCTGGTGGACAGCGCCGTGGTGCCGCTGCCGGCCCGGGTCGCTATGGCGACCTCCAAGTTCGAGTTGAGCTGCCATAGCCCCTACGATATGAACGTGCGGGCCGTGGAGTACAACTTCAAGTCCAACCAAACCTACAGGAGGGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ad9d33cd32eab5fd37f5cec7ddd1b9824088ca849d2d1d2d8e10d7de674f609
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8487
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
DNA homology and adsorption specificity of Pseudomonas aeruginosa virulent bacteriophages Kulakov,L.A., Ksenzenko,V.N., Kochetkov,V.V., Mazepa,V.N. and Boronin,A.M. 1985 2993807 GenBank
Genomes of phiKMV-like viruses of Pseudomonas aeruginosa contain localised single-strand interruptions Kulakov,L.A., Ksenzenko,V.N., Shlyapnikov,M.G., Kochetkov,V.V., Del Casale,A., Allen,C.C.R., Larkin,M.J., Ceyssens,P.J. and Lavigne,R. 2009-08 — GenBank