Protein

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Genbank accession
XNL96042.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MSRELMPKSGIMMPHVVVTRDAAVVGVSTVDGQAGAINLTGKYLQKTDAAATYQTKTEGASKDFVLDSIQPIMSGALFREDPWVVNDTPFRSTGANGVESVDMMKVTTDNSIKIGSYASSVQGVEIHSAGRLQVVDQNDSGVETKYPVYSKRYRPEIDDLPFAAIGSYVKDSKGRTIGVTRTGINSDIKQLTQKVTFTQPVTVPDAVGDYDAVTLRQLRNSGGGSGGPTMSGISNFGIGDFHLRDSRAFIPAFEVTSDGQLLNRSEYPDLWAYAQLLSPISDSEWLSDAQKRGQYSTGDGSTTFRVPDRNGVQVGSIKELFGRGDGGISSNNGVIYDSAAPNIRGKVAGVSAGTYAGIFGTSVQDSFYTDNSLYPAGGGDTIPPGSGAVDGRNNTLVFDASQSNPVYGRYSISDNIIPRNFVGVWTIRAHGGFTAANTSWSVINSDSAAPALNTSVVGGKVESKYTNPTSSQYARMYISSSWGSVCSAVIEAQGASTHAYKFYEDGTVDFRQSGKTNPFRMYTPTGIWTGLTDAGPNNLTTNGMDRVAISSGSDTVVRGYSIGGSKPNGYPTKVGHHMYLPGNDAFGIACTTIGGDNGRFCRYFYDIDGQMYGSTDYGNFSYTKSGVSDENLKHNIVDIDAERAIEVIKGLKFKSFVYNDDEKNRSRRGIIAQQAETVEPLYVKTRKYPGMEKGSPEIEQKELDTTPMLLDTMQVVQDLLKRIEVLESKLAEK
Physico‐chemical
properties
protein length:733 AA
molecular weight: 79003,92500 Da
isoelectric point:5,58656
aromaticity:0,09004
hydropathy:-0,39154

Domains

Domains [InterPro]
DC_1514
STR
20–334
DC_1514 DC_0253
SSF88874
STR
255–431
SSF88874 IPR030392
IPR030392
CHP
628–680
IPR030392
XNL96042.1
1 733
Architecture
STR
STR 20-733
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNL96042.1
1 733
Domain Start End Length (AA) Confidence
N-terminal 1 73 73 0,9716
Central domain 74 272 200 0,4223
C-terminal 273 733 460 0,9122
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-73
Central
74-272
C-terminal
273-733

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ev_rybdy3
[NCBI] 		3390212 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNL96042.1 [NCBI]
Genbank nucleotide accession
PQ819470.1 [NCBI]
CDS location
range 74406 -> 76607
strand -
CDS
ATGTCTAGAGAATTAATGCCCAAATCTGGTATAATGATGCCTCATGTGGTTGTAACCAGAGACGCGGCTGTTGTTGGGGTTTCTACTGTAGATGGACAGGCTGGAGCTATTAACCTCACCGGAAAATATTTACAGAAAACCGACGCAGCTGCTACCTATCAAACTAAAACAGAGGGTGCATCTAAAGATTTTGTGCTGGATTCGATTCAACCTATTATGTCTGGTGCCCTGTTCCGAGAAGACCCTTGGGTTGTTAATGATACACCATTCCGTTCTACTGGAGCTAATGGTGTAGAATCAGTTGATATGATGAAAGTTACTACTGATAACTCAATCAAGATTGGTAGTTATGCCTCTTCAGTTCAAGGTGTAGAGATTCACTCTGCTGGTCGTCTTCAGGTTGTTGACCAGAATGATTCTGGGGTAGAAACTAAGTACCCTGTTTATTCTAAACGCTATCGTCCTGAGATTGATGACCTACCTTTTGCTGCTATTGGCTCTTATGTTAAAGACTCCAAGGGTCGCACTATTGGGGTTACTCGTACAGGGATTAACTCTGATATCAAACAGCTCACACAGAAGGTCACTTTCACCCAACCAGTAACTGTTCCTGATGCGGTTGGTGATTATGATGCGGTTACTTTGAGACAGCTTCGAAATAGTGGTGGTGGCTCTGGTGGTCCTACGATGAGCGGTATCTCTAACTTCGGTATTGGTGATTTCCATTTACGTGATAGTCGAGCTTTTATTCCAGCTTTTGAGGTAACATCAGACGGTCAGCTTCTTAACCGTTCAGAGTACCCAGATCTCTGGGCTTATGCACAGTTGTTATCCCCTATCTCAGATTCTGAATGGCTTAGTGATGCCCAAAAACGTGGACAGTACTCTACTGGTGACGGTTCTACTACTTTCCGCGTTCCAGACCGCAACGGGGTTCAGGTCGGTTCTATTAAGGAGCTATTTGGTCGCGGTGATGGTGGTATATCGTCCAACAATGGTGTTATCTACGATTCTGCTGCACCTAATATCAGAGGTAAGGTCGCTGGTGTATCAGCCGGGACTTATGCAGGGATATTCGGGACGTCTGTGCAGGATTCATTCTATACGGACAACAGTTTGTATCCGGCTGGTGGGGGGGACACTATACCTCCGGGGTCCGGTGCAGTTGATGGACGTAATAATACTCTAGTCTTCGACGCAAGCCAGTCCAACCCAGTTTATGGTCGTTATAGTATCTCTGATAACATTATACCGAGAAACTTCGTAGGTGTTTGGACTATCCGTGCCCATGGTGGATTTACTGCTGCTAATACTTCTTGGAGTGTCATTAACAGTGATAGCGCAGCTCCGGCTTTAAATACTTCTGTGGTTGGTGGTAAGGTAGAATCTAAATATACTAACCCAACCTCTTCCCAATATGCTCGTATGTATATTTCCTCTTCTTGGGGAAGTGTTTGCTCCGCCGTGATTGAAGCACAAGGTGCAAGTACTCACGCTTATAAGTTTTATGAGGATGGCACTGTTGATTTTAGGCAGTCTGGTAAGACAAACCCATTCCGCATGTACACACCAACTGGAATTTGGACTGGACTGACGGATGCGGGGCCAAACAATTTAACCACCAATGGAATGGATAGGGTGGCGATTTCTAGTGGCTCTGACACAGTGGTGCGTGGGTACTCTATTGGAGGATCTAAACCTAATGGTTATCCAACCAAGGTTGGGCATCATATGTATTTGCCGGGAAATGACGCCTTCGGTATCGCCTGTACAACTATTGGAGGAGACAACGGAAGGTTCTGTCGATATTTTTACGACATAGACGGGCAGATGTATGGCTCAACTGATTATGGAAACTTTAGCTATACAAAGAGTGGTGTCTCGGATGAAAACCTGAAACATAACATTGTTGATATTGATGCAGAAAGAGCTATTGAAGTAATAAAAGGACTGAAGTTCAAATCCTTTGTTTACAACGATGATGAGAAGAATCGATCTCGTCGTGGTATCATTGCACAGCAGGCAGAGACGGTAGAACCTCTGTATGTTAAGACTCGCAAATACCCAGGAATGGAGAAAGGCTCTCCAGAAATCGAGCAGAAAGAGCTAGACACTACTCCAATGCTCCTTGACACTATGCAAGTAGTTCAAGATCTTCTGAAGCGTATTGAAGTTCTGGAATCGAAGTTAGCAGAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73fbb467597cdc5a2922db71ab19819cdadd6f6117252ac6b3be97dfdfb67c67
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5937
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50