Protein

View in Explore
Genbank accession
XTP78802.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAAAIALPIVSAIVSTAISYAFPSDGPRLRDTKVSASTYGNVIPEIYGTARVGGNMIWSKPFTEKKKKKRAGKGGSYYNEYTYYCDFAMAFCRGPVKEVRRIWADGKVIYDTTGGSEVIDNNKYRFRFYPGDETQLPDSLIVEDKGADYAPAYRGLCYVVFDDFALADFGNRIPQIMAEVYAGDEGGAAITDIVPLPSSPVTGGSYQLGQMMIDADRGYFYLVDSVSNPAGTVLRRFLLANGKEDRREIVSIPQTQFPPSVYDSPDLTSVRAVTSKGELLCVFGGVNNYMRIEKLDPYSWQSLGTIGRSYPFAGTPENSLEHSNTNFEISRDEKGNYLCLTLGVFGEYNIFDPSDMSFKAKGEMAGWGGPGTPMYICARQGGSAASRRFYHVTYTGGASLQVCSLNEVLYNHPLDHPGDSQTATSWAFWDEGDPGVVFFYSDGPNRYIAKWSESTGVLAWKTQLRNSDPFCGYGVYGLRARIKDNEFHWVYNKHLFSINTATGQWIDRTFDQDFYKSDNDKTAEQVNDGDKGLLLPRDISEDYVIYDPRRNIVICVGQIQGQNGIVHVGGYTGGKTSVGAIVERLLVSTGQMTSNDYDLTPLYDIPVYGYGYASSTDIKSIIAELRNLFMFDLVESDGRLVARVRGDQDPDAEVPWKLLGSQSGPTPDKADYWKETRMSESDLPASIDLTYSNIDDDYNPSTAKSKRIASPVATMLSRQQVKAECNLVMDATEAKNRVNIMLYTQWEERTQHQTALPWLYANLDASDLISVTMEDGRNYFERIGSIEFGADFSSRLETYGTDSGAYLSDKTGDGGGAGRPTVVPAPKPVVGFILNTPLLRDTHDSGGNFSNWYSAIGAGAPGVFLGGTMFKSANSQDYVDLYQEPESAEWGTVMGVVPSPSHGWFALDWETRITITPAVDFFELESITDDELWEGLNLVMIGDEVLQFRDAVQNADGTWTIWNLLRGRRGTQYACDNHKAGERFLFLDERSIEFQAENLDTSGQNRWYKAVGSGMSLFETDPIQINYQPRDLMPYRPADIRRAVAGGDVTVTWKRRTRFTATLKDGTGEVSLNEGAEAYEAYVLAAPYSGDLSRQDAPAVYRRKYTLTSPSFTYTAAEQAADGFDVNLDTLHVVIYQLSSVVGRGFPGARSIESWQDF
Physico‐chemical
properties
protein length:1158 AA
molecular weight: 128403,62950 Da
isoelectric point:4,82213
aromaticity:0,11831
hydropathy:-0,37832

Domains

Domains [InterPro]
DC_1879
ATT
1–248
DC_1879 IPR007110 DC_1657 IPR056490
IPR032876
ATT
615–787
IPR032876
DC_1311
RBD
784–1157
DC_1311
XTP78802.1
1 1158
Architecture
ATT
STR
STR
ATT
STR
RBD
ATT 1-248 | STR 259-339 | STR 557-614 | ATT 615-787 | STR 788-813 | RBD 814-1157 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTP78802.1
1 1158
Domain Start End Length (AA) Confidence
N-terminal 1 197 197 0,8473
Central domain 198 577 381 0,8150
C-terminal 578 1158 580 0,1142
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-197
Central
198-577
C-terminal
578-1158

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage RBC57
[NCBI] 		3411843 No lineage information
Host Caulobacter crescentus CB15
[NCBI] 		190650 Bacteria > Proteobacteria > Alphaproteobacteria > Caulobacterales > Caulobacteraceae > Caulobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTP78802.1 [NCBI]
Genbank nucleotide accession
PV231353 [NCBI]
CDS location
range 150362 -> 153838
strand +
CDS
ATGGCCGCCGCCATTGCCCTTCCGATCGTCTCCGCCATCGTCAGCACGGCGATCAGCTACGCCTTCCCGAGCGATGGCCCGCGCCTGCGCGACACCAAGGTCTCGGCCTCGACCTACGGCAACGTGATCCCGGAAATCTACGGGACCGCGCGCGTCGGCGGCAACATGATCTGGTCCAAGCCGTTCACCGAGAAGAAGAAGAAGAAGCGGGCCGGCAAGGGCGGCTCCTACTACAACGAATACACCTACTACTGCGACTTCGCCATGGCCTTCTGCCGGGGGCCGGTCAAGGAAGTGCGCCGCATCTGGGCCGACGGTAAGGTGATCTATGACACCACCGGCGGCTCGGAGGTGATCGACAACAACAAGTACCGCTTCCGCTTCTATCCCGGCGACGAGACGCAGCTTCCCGACAGCCTCATCGTCGAGGACAAGGGCGCCGATTACGCCCCCGCCTACCGGGGCCTCTGCTACGTCGTGTTCGACGACTTCGCCCTGGCCGATTTCGGCAACCGCATCCCGCAGATCATGGCCGAGGTCTATGCCGGAGACGAAGGCGGCGCGGCGATCACCGACATCGTCCCGCTGCCGAGTTCGCCGGTCACTGGTGGGTCCTATCAGCTTGGCCAGATGATGATCGACGCTGACCGGGGCTATTTCTACCTCGTCGATTCGGTGTCCAACCCGGCAGGCACCGTTCTGCGCCGCTTCCTGCTGGCGAACGGCAAGGAGGATCGGCGCGAAATCGTCTCGATCCCGCAGACCCAGTTCCCGCCCTCGGTCTATGACAGCCCCGATCTGACCTCGGTCCGGGCCGTCACTTCCAAGGGCGAGCTTCTCTGCGTCTTCGGCGGGGTCAACAACTACATGCGGATCGAGAAGCTCGATCCCTATTCCTGGCAGTCGCTGGGGACGATCGGCCGCAGCTATCCCTTCGCGGGCACGCCCGAAAACAGCCTGGAGCACTCCAACACCAACTTCGAGATTTCGCGGGACGAGAAGGGCAACTATCTCTGCCTGACGCTCGGGGTGTTTGGTGAGTACAACATCTTCGATCCCTCCGACATGTCGTTCAAGGCTAAGGGCGAAATGGCGGGCTGGGGTGGTCCGGGCACGCCGATGTACATCTGCGCCCGCCAGGGCGGCTCGGCGGCCTCCCGCCGCTTCTACCACGTCACCTATACGGGCGGGGCGTCCTTGCAGGTGTGCAGCCTGAACGAGGTGCTCTACAATCATCCGCTTGATCATCCTGGAGATTCCCAGACCGCGACGTCCTGGGCCTTCTGGGACGAGGGCGATCCGGGGGTGGTCTTCTTCTATTCCGACGGCCCCAACCGCTACATCGCCAAGTGGTCCGAATCCACCGGCGTGCTGGCCTGGAAGACCCAGCTTCGCAACTCCGATCCGTTCTGCGGCTATGGGGTCTATGGCCTGCGCGCCCGGATCAAGGACAACGAGTTCCACTGGGTCTACAACAAGCACCTGTTCTCGATCAACACCGCCACGGGGCAGTGGATCGACCGGACCTTCGACCAGGACTTCTACAAGAGCGACAACGACAAGACCGCCGAACAGGTCAACGACGGCGACAAGGGCCTGCTGCTGCCGCGCGACATCTCCGAGGACTATGTCATCTACGATCCGCGCCGCAACATCGTGATTTGCGTCGGACAGATTCAGGGCCAAAACGGCATCGTCCACGTCGGCGGCTATACGGGCGGCAAGACCTCGGTGGGGGCCATTGTCGAGCGTCTTCTGGTCTCGACGGGGCAGATGACCTCGAACGACTACGACCTGACGCCGCTCTACGACATCCCGGTCTACGGGTACGGCTACGCCTCCTCGACCGACATCAAGTCGATCATCGCCGAACTGCGCAACCTCTTCATGTTCGACCTCGTCGAAAGCGACGGTCGACTGGTCGCGCGCGTGCGCGGCGATCAGGACCCTGACGCCGAGGTGCCCTGGAAGCTCCTGGGCTCCCAGAGCGGCCCGACCCCGGACAAGGCCGACTACTGGAAAGAGACCCGGATGTCGGAGTCCGATCTTCCGGCCTCGATCGACCTGACCTATTCGAACATCGACGACGATTACAACCCGTCGACGGCCAAGTCCAAGCGGATCGCCTCGCCGGTGGCGACCATGCTGTCGCGCCAGCAGGTCAAGGCCGAGTGCAACCTCGTCATGGACGCGACCGAGGCCAAAAACCGCGTCAACATCATGCTCTACACCCAGTGGGAGGAGCGCACGCAGCACCAGACGGCCCTTCCCTGGCTCTACGCCAATCTCGACGCCTCGGACCTGATCTCGGTGACCATGGAGGACGGCCGCAACTACTTCGAGCGGATCGGCTCGATCGAGTTCGGCGCCGACTTCTCCTCGCGTCTGGAAACCTACGGCACCGACAGCGGCGCCTACCTTTCGGACAAGACCGGCGACGGCGGCGGCGCTGGGCGGCCCACGGTCGTGCCGGCCCCCAAGCCGGTGGTGGGCTTCATCCTCAACACCCCGTTGCTGCGCGATACCCACGACAGCGGCGGCAACTTCTCCAACTGGTATAGCGCCATCGGCGCCGGCGCGCCGGGCGTGTTCCTCGGCGGCACGATGTTCAAGTCCGCCAATTCGCAGGACTACGTTGATCTCTACCAGGAGCCGGAGAGCGCCGAGTGGGGCACCGTGATGGGTGTCGTGCCCTCGCCCTCGCACGGCTGGTTCGCGCTCGACTGGGAGACGCGCATCACCATCACGCCGGCGGTCGACTTCTTCGAACTGGAATCGATCACCGACGACGAGCTTTGGGAAGGCCTCAACCTCGTGATGATCGGCGACGAGGTCCTCCAGTTCCGCGACGCGGTGCAGAACGCCGACGGCACCTGGACGATCTGGAATCTGCTGCGCGGGCGCCGGGGCACGCAATATGCCTGCGACAATCACAAGGCCGGCGAGCGCTTCCTGTTCCTCGACGAGCGCTCGATCGAGTTCCAGGCCGAGAACCTCGACACCTCGGGCCAGAACCGCTGGTATAAGGCCGTCGGCTCGGGCATGTCGCTGTTCGAGACCGATCCGATCCAGATCAACTACCAGCCCCGCGACCTCATGCCCTACCGCCCGGCCGACATCCGTCGGGCGGTCGCGGGCGGCGACGTCACCGTGACCTGGAAGCGCCGCACGCGCTTCACGGCCACGCTCAAGGATGGCACCGGCGAAGTCAGCCTCAACGAAGGCGCCGAAGCCTACGAGGCCTATGTGCTCGCCGCACCGTACTCGGGCGACCTGTCGCGTCAGGACGCGCCGGCCGTCTACCGCCGCAAATACACCCTGACGAGTCCGAGCTTCACCTACACGGCGGCCGAGCAGGCGGCCGACGGATTTGACGTGAATCTTGACACTCTGCACGTGGTGATCTATCAGTTGAGTTCGGTTGTTGGTCGGGGTTTCCCCGGCGCGCGCTCGATTGAGTCCTGGCAGGACTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9cac97b88705379b81887fc8972b28930fad2a0fb9ef5d704d7a8d40ce82e5c7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2763
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Dolichocephalovirinae Phages Are Present as Episomal Pseu-dolysogens Within a Wide Range of Soil Bacteria Mohammadi,T. and Ely,B. 2025-05-28 — GenBank