Protein

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Genbank accession
NP_463478.1 [GenBank]
Protein name
tail family protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MATSLALVIEGKTYMLNELFDLEVGEVSREPPQIVNNYTEFAGSDGARTTDSNFSMFPISILCHFQTKTADLYHIKLDELLELIYQRKEYFLVHSKTPGKKYRVHPSGVAIYRKAPGYADLTLEFDVFRGYSESLSSTLSDSEIDCDKWQFGQGLAMEDYRYTHTKSRFIIYNGGSFDIDPREHQLTITIRGQNEGELVINNITTGDRFIYYPALSATDTLVIDSATPRINGNPCGRSTNHGLISLQKGENLIEISNTSHLDTRWDFSFLYK
Physico‐chemical
properties
protein length:272 AA
molecular weight: 30903,29580 Da
isoelectric point:5,27872
aromaticity:0,11397
hydropathy:-0,37647

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
6–132
G3DSA:2.40.30.200 DC_0197
IPR008841
STR
9–126
IPR008841
NP_463478.1
1 272
Architecture
ATT
STR
ATT 6-132 | STR 133-272
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
NP_463478.1
1 272
Domain Start End Length (AA) Confidence
N-terminal 1 270 270 0,7341
Central domain 271 270 1 0,0375
C-terminal 271 272 1 0,8845
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-270
Central
271-270
C-terminal
271-272

Taxonomy

  Name Taxonomy ID Lineage
Phage Listeria phage A118
[NCBI] 		40521 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Listeria monocytogenes
[NCBI] 		1639 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_463478.1 [NCBI]
Genbank nucleotide accession
NC_003216 [NCBI]
CDS location
range 14928 -> 15746
strand +
CDS
ATGGCTACATCACTAGCATTAGTAATTGAAGGTAAAACATATATGCTTAATGAATTATTTGATTTAGAGGTAGGAGAAGTGAGCAGAGAACCGCCACAAATAGTTAATAATTACACTGAATTCGCTGGTTCTGATGGCGCCAGAACAACAGATAGTAACTTTAGTATGTTTCCTATCTCTATTTTGTGCCATTTTCAGACTAAGACAGCGGATTTATATCATATTAAATTAGATGAGTTATTGGAACTTATTTATCAGAGAAAAGAATACTTTTTAGTTCATTCTAAAACGCCTGGTAAAAAATATAGAGTACATCCTAGTGGCGTTGCTATTTACCGTAAAGCGCCGGGATACGCAGATTTGACACTTGAATTCGATGTGTTTCGAGGTTATTCAGAATCACTAAGTTCTACGCTTAGCGATTCTGAAATTGATTGCGATAAATGGCAGTTCGGCCAAGGTCTAGCAATGGAGGATTATAGATATACACACACTAAAAGCCGTTTCATTATTTATAATGGCGGTAGTTTTGACATAGATCCGCGCGAACACCAGTTAACCATAACGATAAGAGGACAAAATGAAGGAGAATTAGTTATTAACAACATTACAACTGGAGATAGATTTATCTATTATCCTGCTCTAAGCGCTACAGACACGTTAGTAATTGACTCTGCTACACCTAGAATAAACGGTAATCCTTGTGGGCGCTCAACAAATCACGGTTTAATAAGTTTGCAAAAAGGAGAAAATCTTATCGAAATTAGTAATACTAGTCATTTAGATACGAGATGGGATTTCTCCTTTTTGTATAAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
a80e4dbbb81c62b76145686ed37dd17de171cb865fa40084d4edb71bb5865f96
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9266
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50