Protein

View in Explore
Genbank accession
YP_009779232.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,57
Protein sequence
MSQLNVDRLISLGGGGGTASIQLESSGNFNFDTGTLYVDSTNNEVGIGTTTPRASLDIATTDGIIVPVGTTAQRPSSPIEGIFRYNSTDRTFEGYSFNEGTNAVEWGPIAGAGGGTPNQSTNRYSFDYSKGAVLKSDGTNAYWEIAGQATEWSMARIWTHGYVGGGYQSGSPWNNVNRTVHATDTSTNLGNTLDRSGAYMAGSFSDNRHWFHSMENTYRGSSNYTSGFSMTSESGITHQSAWDMTVSRASMGSFQDYEFQGGYSYLIGGGNARTDVMNLKTEVMRTSGFPPNHADGGDDPTWGGNARLKGWYKRAGTRQALIFNTESWQNWAQAPGGDGWKKILGTMLGHMYVGTGNNAQNGNQRVDDSSGVQVGGLDFGNMGEENFQIGMRKGYCLGNYNGSQNNNTFKVNYATDGYNNLGGSSPPTGHGGMSSAHCSSASAISGVDDAGAVQYDYGTNIPNY
Physico‐chemical
properties
protein length:464 AA
molecular weight: 49521,99610 Da
isoelectric point:5,16674
aromaticity:0,10991
hydropathy:-0,62177

Domains

Domains [InterPro]
DC_0841
STR
1–278
DC_0841
IPR059888
RBD
46–111
IPR059888
YP_009779232.1
1 464
Architecture
STR
STR 1-278 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM12 isolate RW_06_0310
[NCBI] 		2790659 Uroviricota > Caudoviricetes > Pantevenvirales > Brizovirus > Brizovirus rhodeisland06
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009779232.1 [NCBI]
Genbank nucleotide accession
NC_047716 [NCBI]
CDS location
range 30106 -> 31500
strand +
CDS
ATGTCTCAATTAAATGTTGACAGATTAATATCCTTAGGTGGAGGTGGTGGTACTGCCTCCATTCAATTAGAGTCTAGTGGTAACTTTAATTTTGATACTGGCACTCTGTATGTTGATAGTACCAATAATGAGGTGGGGATTGGTACTACTACGCCAAGAGCATCTTTAGATATTGCTACTACTGATGGTATTATCGTACCCGTAGGAACAACTGCTCAAAGACCATCATCACCTATTGAAGGTATATTTAGATATAACTCAACAGACCGAACATTTGAAGGTTATTCTTTTAATGAAGGTACTAATGCTGTAGAATGGGGACCAATTGCTGGTGCTGGTGGTGGAACACCTAATCAATCTACAAACAGATATAGTTTTGACTATTCTAAGGGTGCTGTATTAAAATCTGACGGAACTAATGCTTATTGGGAAATTGCTGGTCAGGCAACTGAATGGAGCATGGCAAGAATTTGGACGCATGGATATGTTGGTGGAGGTTATCAAAGTGGTAGTCCCTGGAATAATGTAAACCGTACTGTTCACGCTACAGATACATCAACAAACCTTGGCAATACTTTAGATAGATCTGGTGCTTACATGGCAGGATCTTTCTCAGATAATCGTCACTGGTTCCACTCAATGGAGAACACTTATAGAGGTTCTTCTAACTATACATCTGGATTCAGTATGACATCTGAGTCAGGTATTACTCACCAGTCAGCATGGGATATGACTGTTAGTAGAGCTTCGATGGGTTCATTCCAAGATTATGAATTCCAAGGAGGTTATTCATATTTAATTGGTGGTGGTAATGCTAGAACTGATGTGATGAATCTCAAAACTGAGGTTATGAGAACATCTGGATTTCCACCTAATCATGCTGATGGAGGTGATGATCCTACATGGGGTGGTAACGCAAGACTGAAGGGTTGGTATAAGAGAGCTGGTACTCGTCAAGCATTAATTTTCAATACTGAATCTTGGCAGAACTGGGCACAAGCACCAGGTGGTGATGGATGGAAGAAGATTTTAGGCACAATGTTAGGTCACATGTATGTGGGCACTGGCAATAATGCTCAGAATGGTAACCAAAGAGTTGATGATTCGAGTGGTGTTCAGGTAGGAGGTTTGGACTTTGGTAACATGGGAGAAGAAAACTTCCAGATTGGTATGAGAAAAGGTTATTGTTTGGGTAACTATAATGGTTCTCAGAATAATAATACCTTCAAGGTGAACTATGCTACTGATGGTTATAATAACCTCGGGGGTTCTTCACCTCCAACGGGTCATGGTGGCATGAGTTCTGCTCACTGTTCATCCGCATCTGCTATTTCGGGTGTTGATGACGCTGGAGCAGTTCAGTACGATTACGGCACAAATATTCCTAACTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7d4bb4f25652e71cc522243d97c9a1c968f748b04020257b5b0682109d808447
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3741
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50