Protein

View in Explore
Genbank accession
XYU01465.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MQDVAGFGLQVRVIGSKTFPAGFTITEFPDDIDPFDLPALQINDAAMGLNGDLIVWSKANPLNFTLGVIPGTEGQKNMAVLYEANRPARGKRPAKDIITIVGIYPDGSSITLSSGVIFDGLPGKSVASAGRYKSVPYNFRFEQMARVEV
Physico‐chemical
properties
protein length:149 AA
molecular weight: 16008,14330 Da
isoelectric point:5,36324
aromaticity:0,09396
hydropathy:0,02081

Domains

Domains [InterPro]
IPR054440
STR
2–144
IPR054440
XYU01465.1
1 149
Architecture
STR
STR 2-144 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage RF1
[NCBI] 		3455188 Viruses > unclassified bacterial viruses >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYU01465.1 [NCBI]
Genbank nucleotide accession
PV942687.1 [NCBI]
CDS location
range 28494 -> 28943
strand -
CDS
ATGCAAGACGTTGCTGGCTTCGGCCTACAGGTCCGAGTAATCGGGTCTAAGACGTTCCCGGCCGGTTTCACTATCACCGAGTTTCCGGATGATATTGACCCGTTCGACCTGCCTGCGCTGCAGATTAATGATGCGGCGATGGGCCTTAATGGCGACCTGATTGTCTGGTCTAAAGCTAACCCACTGAACTTCACGCTGGGCGTTATTCCTGGTACTGAAGGTCAGAAGAACATGGCGGTACTCTACGAAGCAAACCGACCTGCTCGTGGTAAGCGTCCAGCCAAGGATATTATCACCATTGTGGGCATCTACCCTGACGGCTCAAGCATCACGCTGTCAAGTGGTGTAATCTTCGACGGTCTGCCAGGTAAGTCAGTTGCTTCGGCTGGGCGTTATAAGTCCGTGCCTTACAACTTCCGCTTCGAGCAGATGGCTCGCGTAGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
09ddea124ca6a3f80d515377fd97b1e2d0a9240a248807859353e5d1236752f5
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7566
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50