Protein

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UniProt accession
W6EKG4 [UniProt]
Protein name
Tail collar domain-containing protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MTQFDFGTINPTLKNGTDLASDLNQFRDALLTLHSGSARPSYVQPGMQWIDNSTPTKWKLNLYDGTDDILIGTFDTTNNFFKAANTRQEVTKTAAYTLVSDDQFVAILMNSASVVATGLPAVASSNSEFYFVRNIGTAITNIDPNGSEQIEGTTLLPLPPGASAWIWPNAAKTAWRATVVYPETYFAKSSDDVGKVHTCAFTAVPAGTMECNGAAVSRTVYSGLYAKLGTTWGVGDGSTTFNLPDFRGEFLRGWDNSRGVDSGRVFGSAQGQDMQPHNHTVDPPSTTTSDNTHNHTGTAANAGAHNHGMNLFTSGTAQARPMPASGQIGSNTELNTDTDGEHSHALTINNNTHNHTVNIGSFASGTSGTTETRPRNKTVMYVIVY
Physico‐chemical
properties
protein length:385 AA
molecular weight: 41204,80810 Da
isoelectric point:5,56888
aromaticity:0,08831
hydropathy:-0,38831

Domains

Domains [InterPro]
DC_1155
STR
4–385
DC_1155
IPR037053
ATT
187–247
IPR037053
SSF88874
STR
191–383
SSF88874
IPR011083
ATT
194–251
IPR011083
W6EKG4
1 385
Architecture
STR
ATT
STR
STR 4-186 | ATT 187-251 | STR 252-385
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage vB_RglS_P106B
[NCBI] 		1458697 Uroviricota > Caudoviricetes > Rigallicvirus >
Host Rhizobium gallicum
[NCBI] 		56730 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHJ10721.1 [NCBI]
Genbank nucleotide accession
KF977490 [NCBI]
CDS location
range 28067 -> 29224
strand +
CDS
ATGACACAATTTGATTTTGGCACAATCAACCCAACTTTAAAAAACGGTACGGATTTAGCGAGCGATCTAAATCAATTCCGAGACGCACTATTAACGTTGCATTCCGGAAGCGCCCGCCCGTCTTATGTGCAACCGGGTATGCAATGGATTGACAATTCAACGCCGACAAAATGGAAACTAAATCTGTACGATGGTACAGATGATATTCTAATCGGTACATTTGACACAACTAACAACTTTTTTAAAGCGGCAAACACCCGACAAGAAGTCACTAAAACAGCAGCTTACACGCTTGTAAGTGATGATCAATTTGTTGCCATTTTGATGAATTCTGCAAGCGTTGTTGCAACCGGACTTCCGGCGGTAGCGTCCAGCAATTCGGAATTCTATTTTGTTCGCAACATTGGAACTGCGATTACGAATATCGATCCGAACGGTTCGGAGCAAATCGAAGGAACAACGCTTTTACCTTTGCCGCCCGGTGCGTCTGCCTGGATTTGGCCTAACGCTGCTAAAACAGCATGGCGCGCAACTGTTGTCTATCCGGAAACTTATTTCGCTAAATCATCGGACGATGTTGGCAAGGTTCACACGTGCGCGTTTACTGCGGTTCCGGCTGGCACAATGGAGTGCAACGGAGCGGCAGTTAGTAGAACCGTTTATTCCGGTCTGTACGCGAAATTAGGGACGACTTGGGGTGTTGGTGACGGTTCAACAACGTTCAATTTGCCGGATTTTCGCGGTGAATTCTTGCGCGGTTGGGATAATTCGCGCGGTGTCGATAGTGGTCGCGTGTTTGGTTCTGCGCAAGGGCAGGACATGCAACCTCACAACCATACAGTTGATCCACCATCAACAACAACGTCAGATAATACGCACAACCATACTGGTACGGCGGCAAATGCGGGCGCACATAATCACGGAATGAACCTTTTCACTTCGGGTACTGCGCAAGCTAGACCGATGCCTGCAAGTGGTCAAATTGGTAGCAACACTGAACTTAACACTGATACCGATGGTGAACACTCGCACGCTTTGACAATTAACAATAATACGCATAATCACACTGTTAATATTGGTTCGTTTGCTTCCGGTACGTCCGGAACTACGGAAACTCGGCCGCGCAACAAAACTGTTATGTATGTAATTGTCTACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
30f602a39c21ca124033a7fefd3df57d1d125af8172252059a814453ce235ad0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7820
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50