Protein

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Genbank accession
AHK11953.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,80
Protein sequence
MADPKYSLVRIDDDIADGAVLTYDAKNDKITDSGMYSSQGELRAAAGSVNVGLQTLASAGEQVIFRNENSHVNYAPPWHVIDEVNGGGSFDRYYSPIQTVTRFADRTDVLENPVFDVYIPIEEVVFRLKMTFPVAHDDVEFEVTQSGNKMWREIMDVSAGDNELVLDMPIAFHPGTYEFSIRPYTTPGVGTDMVPPVKVMGNSQTGQVGYDVVYREFKDKPLATQEYVIATVTGGPADDVMLKSVYDTDNDGKVDSASHADKAATLDGSSGASPSEYYGKDSTGTLGFHPLPQGADESALKASIKANTDEVAKHQTSINAHGVQLAANASAIRSQDLRINHNKGRLDIDEREISGLRGNAVNKLTAESDVSAKTITFKLMAEHGLVDSVLVDLKPFLGLGPVTTSKIYYGFSSDTLINEQEVTTSGSSRNVTSIGGVDVHMTRTQSDDAYMYLWVPDVLGAIKSLNFSGFLSVWKSSALSISGIDGKVFVSPNKTQATDVTFEVTV
Physico‐chemical
properties
protein length:506 AA
molecular weight: 54735,30500 Da
isoelectric point:4,71300
aromaticity:0,08103
hydropathy:-0,25553

Domains

Domains [InterPro]
DC_1058
STR
2–506
DC_1058
AHK11953.1
1 506
Architecture
STR
STR 2-506
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage CHOED
[NCBI] 		1458716 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio anguillarum
[NCBI] 		55601 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AHK11953.1 [NCBI]
Genbank nucleotide accession
KJ192399 [NCBI]
CDS location
range 63661 -> 65181
strand +
CDS
ATGGCAGACCCAAAATACAGCTTAGTGCGTATAGATGATGACATAGCTGATGGTGCAGTTTTAACGTATGATGCCAAGAATGATAAGATTACCGACTCAGGTATGTACTCTTCCCAAGGGGAGCTTAGGGCAGCCGCAGGGTCAGTAAATGTAGGTTTACAGACACTAGCAAGTGCAGGTGAACAGGTAATTTTCCGTAATGAGAATTCACATGTAAATTATGCTCCTCCTTGGCATGTTATTGATGAGGTTAATGGTGGAGGTTCATTTGACCGCTATTATAGTCCCATTCAAACAGTAACAAGATTTGCTGATAGAACAGATGTATTAGAGAACCCCGTTTTTGATGTGTACATTCCTATTGAAGAGGTAGTGTTTAGATTAAAGATGACGTTCCCTGTAGCTCACGATGATGTAGAGTTTGAGGTGACACAATCAGGTAATAAGATGTGGCGCGAGATTATGGATGTAAGTGCAGGTGATAACGAGTTAGTCCTTGATATGCCTATAGCGTTCCATCCGGGTACCTATGAGTTCTCAATTAGACCTTACACGACTCCGGGCGTAGGTACTGATATGGTCCCTCCTGTAAAAGTCATGGGTAATTCCCAGACAGGTCAGGTAGGCTATGATGTGGTTTACCGAGAGTTTAAAGATAAACCATTGGCTACTCAGGAGTATGTAATAGCTACTGTAACTGGCGGTCCCGCTGATGATGTGATGTTGAAGTCTGTGTATGATACAGATAACGATGGTAAGGTAGATAGTGCTTCTCATGCTGACAAGGCTGCTACGCTTGATGGTAGCTCCGGTGCGTCCCCTAGTGAGTATTATGGTAAGGATTCGACAGGTACTCTAGGTTTCCATCCACTTCCACAAGGTGCTGATGAATCTGCCTTAAAAGCCTCTATTAAAGCTAACACTGATGAGGTTGCTAAACACCAGACATCTATAAATGCACATGGAGTCCAGTTAGCTGCCAACGCTAGTGCGATTAGGTCTCAAGACTTACGTATCAATCATAATAAAGGCCGATTAGATATAGATGAGAGAGAGATTTCTGGTCTTAGGGGTAATGCAGTTAATAAACTTACTGCTGAATCTGATGTTAGTGCTAAGACAATTACGTTTAAATTAATGGCCGAACATGGTTTAGTGGATTCTGTGTTAGTAGACCTTAAACCTTTCCTAGGTCTTGGACCTGTCACAACTAGTAAGATTTACTATGGTTTCTCTTCAGATACTCTTATCAACGAACAGGAAGTAACAACATCTGGTTCCTCTAGAAATGTTACATCCATAGGTGGTGTAGATGTGCATATGACACGTACTCAATCTGATGACGCCTATATGTACCTTTGGGTCCCTGATGTTCTAGGGGCTATTAAATCTTTGAACTTCAGTGGTTTCTTATCTGTGTGGAAAAGTTCAGCTTTATCTATAAGCGGTATAGATGGTAAGGTTTTTGTTAGTCCTAATAAAACACAGGCTACTGATGTAACATTTGAGGTAACAGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8d9c6ceaa7848110e0c08ad0b2b8db48e1a83f67604ae656398663bc3a5c6c3b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5297
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Vibrio anguillarum bacteriophage CHOED of the family Podoviridae, successfully used for phage therapy in aquaculture Romero,J., Gajardo,F., Higuera,G., Castillo,D., Middleboe,M., Garcia,K., Ramirez,C. and Espejo,R. 2014-08-28 — GenBank