Protein

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Genbank accession
AUM57599.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAIETNAVVVTDLNPLYPRDRDYIYEGAAQIRLIKQTLQNTFPNVTEPVQLDSDSLNILASKVTFTGDSMDVGGLMIKNATPGTGDSDVVTKGQMEAFMQNWMANKLYRIGSYYITEEDINPGDSSSLGFGSWAKVTGVIMGTGVVNPDGSVPNAQRVEFQAGGTGGRVFNTIRTENVPLMTVNGSSFSLSSNTHSHNMVFGRGDASGHNSSPNWYSPGGGYSQRTENDTHTHTISGSVSLGRDDISRQPINTLPPFRAAHIWRRIS
Physico‐chemical
properties
protein length:267 AA
molecular weight: 28924,77110 Da
isoelectric point:5,64584
aromaticity:0,07865
hydropathy:-0,39963

Domains

Domains [InterPro]
DC_0570
ATT
1–70
DC_0570 DC_0154
IPR053827
ATT
104–266
IPR053827
AUM57599.1
1 267
Architecture
ATT
STR
ATT
ATT 1-70 | STR 71-103 | ATT 104-266 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUM57599.1
1 267
Domain Start End Length (AA) Confidence
N-terminal 1 182 182 0,5806
Central domain 183 256 75 0,0065
C-terminal 257 267 10 0,9964
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-182
Central
183-256
C-terminal
257-267

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage LAMP
[NCBI] 		2065191 Uroviricota > Caudoviricetes > Mktvariviridae > Kuravirus > Kuravirus LAMP
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUM57599.1 [NCBI]
Genbank nucleotide accession
MG673519 [NCBI]
CDS location
range 15698 -> 16501
strand +
CDS
TTGGCTATCGAAACTAATGCGGTAGTAGTTACCGACTTGAATCCACTCTATCCTAGAGACAGGGATTATATCTACGAAGGGGCGGCTCAAATCCGCCTCATTAAACAAACACTACAAAACACATTCCCCAATGTTACAGAACCAGTTCAGTTGGACTCAGATTCTCTCAATATTCTGGCTAGCAAAGTTACCTTTACTGGTGACTCTATGGATGTTGGTGGGTTGATGATCAAGAATGCCACTCCGGGTACAGGTGATAGCGATGTTGTCACTAAAGGCCAGATGGAAGCTTTCATGCAGAACTGGATGGCTAATAAACTTTACAGGATTGGCTCTTACTATATCACTGAAGAAGATATTAACCCCGGTGATAGTTCTTCTCTTGGTTTTGGCTCTTGGGCTAAAGTGACTGGTGTTATTATGGGTACTGGTGTAGTAAACCCTGATGGCTCTGTTCCTAATGCTCAGAGGGTTGAATTCCAAGCAGGTGGTACTGGTGGTCGTGTATTCAATACCATTCGAACAGAGAACGTACCTTTGATGACAGTTAATGGCTCCAGCTTCTCCTTATCCAGTAACACCCACAGCCACAATATGGTATTTGGTCGTGGAGATGCTAGTGGTCATAACAGCTCACCAAACTGGTATAGTCCAGGTGGTGGTTACAGTCAGAGAACGGAGAATGACACTCACACTCATACAATCTCTGGTAGTGTAAGTCTTGGTCGTGATGATATCTCTCGTCAACCTATTAACACTTTGCCACCATTCAGAGCAGCTCACATTTGGAGACGTATTAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
80d423a4464b0a665bf251110231d30098c77cf097d76e619de6e94746c6dd68
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7104
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A novel LAMP bacteriophage infecting Escherichia coli Golomidova,A.K., Letarov,A.V., Kostryukova,E.S., Babenko,V.V. and Prokhorov,N.S. 2018-01-18 — GenBank