Protein

View in Explore
Genbank accession
QQG30944.1 [GenBank]
Protein name
large distal long tail fiber subunit
RBP type
TSP
Evidence DepoScope
Probability 0,94
TSP
Evidence RBPdetect
Probability 0,76
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MATLKQIQFKRSKIAGVRPTPTVLAEGELAINLKDRLLFTKDDTGAIIDLGFAKGGNIDGNVIHKGNYNQTGDYTINGTFTQTGNFNLTGIARVTRDIIAAGQIMTEGGELISKSASTSHLRFFDGNDRERGIIFSPNNAGLTTQVVNIRVQDYAAGGEHSYSFSGDGILTSPIVNAWKSISSPTVMTDKVITNAKKDGDYDIYSMADNTPLTESETAINHLRSMRNAVGAGIFHEVKDNDGITWYAGDGLEAYLWSFTWSGGLKAGHSISIGTPGGPKGYSELGTASIALGDNDTGFKWHQDGYFFTVNNGTKTFLSGPAETTSLRKMVMGYSVNGTDLTTPPAENYALATVVTYHDNNAYGDGQTLLGYYQGGNYHHYFRGKGTTNVNTAGGLLVTPGDINVIGGSVNIDGRNNASTLLFKGNTTGNSSVDNMTISVWGNTFANVDGDRKNVMEISDDTSWIQYYQRLTSGSIQSHLNGTLGVNESINVGQEVNVSGTIAGNAVNALRIWNDDYAAIFRRSEGSLHIIPTAFGEGKTGDIGPLRPFSLALDTGKVVIPDLDLSHTTFAENGFIKFGGHGAGAGGYDIQYGQAAPIFQEIDDDAVSKYYPIVKQKFLNGKAVWSLGTEINSGTFVIHHLKEDGTQAHTSRFNADGTVNFPDNVQVGGGEATIAKNGNIFSDIWKTFTSAGDTTNIRDAIATRVSKEGDTMTGRLTLKTNSDAVVIDYPADEAGYVKGKKGGADNWYVGNGGADNGLAFWSFQSQGGININPNGEVILSPQGTSIFNINRDRIHMNGAHWVARKSGAWGDQWGLEAPYFLDFGSVGEDSYYPIIKGRSVITGQGYTTSVDLGIRRTPQAWGQAIIRVGNAERGDGPVGIFEFHSSGLFYSPTLIQTPAIGVGTVNGLGTPSIAIGDNDTGLSHGGDGRINMVANSIHIASWGAGYQSHPGLWDSTGAFWTETGRAIVSHGHLVQANDSYSTYVRDVYVRSDIRVKKNLVKFENASEKLSKINGYTYMQKRGTDEEGNQKWEPNAGLIAQEVQAILPELVEGDLDGEALLRLNYNGVIGLNTAAINEHTAEIAELKSEIEELKKLVKSLLK
Physico‐chemical
properties
protein length:1100 AA
molecular weight: 118105,57630 Da
isoelectric point:5,44685
aromaticity:0,09182
hydropathy:-0,31882

Domains

Domains [InterPro]
DC_0538
STR
1–686
DC_0538 G3DSA:6.20.80.10 IPR030392 Coil
DC_0339
STR
615–1023
DC_0339
IPR030392
CHP
990–1088
IPR030392
DC_0247
RBD
992–1100
DC_0247
QQG30944.1
1 1100
Architecture
STR
RBD
STR 1-1023 | RBD 1024-1100
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QQG30944.1
1 1100
Domain Start End Length (AA) Confidence
N-terminal 1 503 503 0,1086
Central domain 504 702 200 0,3295
C-terminal 703 1100 397 0,8360
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-503
Central
504-702
C-terminal
703-1100

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage UPEC01
[NCBI] 		2796516 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQG30944.1 [NCBI]
Genbank nucleotide accession
MW233709 [NCBI]
CDS location
range 73176 -> 76478
strand -
CDS
ATGGCTACTTTAAAACAAATACAATTTAAAAGAAGTAAAATTGCTGGTGTCCGCCCAACCCCAACTGTATTGGCTGAAGGTGAACTCGCAATTAACTTGAAAGACCGCTTGTTATTCACAAAGGATGATACCGGAGCTATTATTGACCTTGGTTTTGCTAAGGGTGGCAATATCGATGGTAACGTTATTCATAAAGGCAATTATAATCAAACCGGTGATTATACCATCAATGGCACATTTACCCAGACAGGTAATTTTAATTTAACTGGAATTGCTCGTGTAACTCGTGATATTATTGCAGCAGGTCAGATAATGACTGAAGGTGGCGAACTGATTTCTAAGAGCGCTTCTACTTCGCACCTTCGTTTCTTTGATGGCAATGACCGTGAACGTGGGATTATCTTTTCTCCAAATAATGCCGGTTTGACAACCCAGGTAGTTAATATTCGAGTACAAGATTACGCAGCAGGCGGTGAGCACAGCTATTCTTTCTCCGGTGATGGTATTTTGACCTCTCCTATAGTTAATGCTTGGAAATCTATTTCATCGCCGACAGTTATGACTGATAAAGTTATTACCAATGCTAAGAAAGATGGTGATTATGATATCTATTCAATGGCTGACAACACTCCTTTAACCGAAAGCGAAACAGCAATTAACCATCTTCGTTCGATGCGCAATGCGGTAGGAGCTGGTATTTTCCATGAAGTTAAAGATAATGATGGAATAACTTGGTACGCTGGCGACGGGTTAGAGGCCTATCTATGGTCGTTTACATGGTCTGGTGGATTGAAAGCGGGCCATTCCATTTCTATAGGCACCCCAGGCGGCCCCAAAGGATATTCTGAATTAGGAACAGCTTCAATTGCCCTCGGTGATAATGACACCGGATTTAAATGGCATCAAGATGGATATTTTTTTACGGTAAACAACGGTACAAAAACTTTCCTTTCCGGTCCGGCGGAAACTACTAGTCTTAGAAAAATGGTTATGGGTTATTCTGTAAATGGTACTGATTTGACTACTCCTCCGGCTGAAAACTATGCTCTGGCAACTGTAGTTACTTACCATGATAATAACGCATACGGTGATGGTCAAACTCTTTTGGGTTATTACCAAGGCGGTAATTACCACCACTATTTCCGTGGTAAAGGCACTACAAACGTTAACACCGCTGGCGGATTGTTAGTTACTCCAGGTGATATTAATGTTATCGGCGGTTCGGTTAATATCGACGGCCGCAACAATGCATCTACTCTGTTGTTCAAAGGAAATACTACAGGAAATAGTTCAGTTGATAATATGACTATCAGCGTTTGGGGTAATACCTTTGCTAATGTTGATGGCGACCGTAAAAACGTAATGGAAATATCTGATGACACTAGCTGGATTCAATATTATCAACGTCTGACTTCAGGTTCTATTCAAAGCCATTTAAATGGAACTTTGGGCGTAAACGAAAGTATAAATGTCGGTCAGGAAGTTAACGTCTCCGGCACTATTGCTGGTAATGCGGTCAATGCTCTTAGAATTTGGAACGACGATTACGCCGCTATTTTCCGTCGTTCAGAAGGAAGTCTTCATATTATTCCAACAGCCTTTGGTGAGGGTAAAACCGGGGACATCGGTCCACTTCGCCCGTTTAGTTTGGCTTTAGATACTGGTAAGGTGGTTATTCCGGACCTAGATTTGAGCCATACAACTTTTGCTGAAAATGGTTTTATTAAATTTGGTGGACACGGCGCAGGCGCAGGTGGATATGATATTCAATACGGCCAGGCTGCTCCTATTTTCCAAGAAATTGATGATGACGCTGTAAGTAAATATTATCCGATTGTCAAACAGAAGTTTTTAAACGGTAAAGCTGTTTGGTCTTTAGGTACTGAAATTAATTCAGGTACATTCGTTATTCATCATCTTAAAGAAGATGGAACACAAGCCCATACCTCAAGATTTAATGCTGATGGTACAGTTAACTTCCCCGATAATGTTCAGGTTGGTGGTGGTGAAGCTACTATTGCTAAAAATGGTAACATCTTCTCTGATATCTGGAAAACGTTCACTTCAGCAGGAGACACTACAAATATTCGCGATGCAATAGCTACTCGTGTTTCAAAAGAAGGCGACACGATGACCGGACGTTTAACTCTTAAAACCAACTCGGATGCTGTTGTTATTGATTATCCAGCAGATGAAGCGGGCTATGTTAAGGGTAAAAAAGGTGGTGCTGATAACTGGTATGTCGGTAATGGCGGTGCTGATAACGGACTTGCCTTCTGGAGTTTCCAATCTCAAGGCGGTATTAATATCAACCCTAACGGTGAAGTTATTCTATCTCCACAGGGCACTAGTATATTCAATATAAACCGTGACCGAATTCATATGAACGGTGCTCACTGGGTTGCGCGTAAATCTGGTGCGTGGGGCGACCAATGGGGCTTAGAAGCACCTTATTTCCTTGATTTTGGTAGCGTTGGCGAAGATAGTTATTATCCTATTATTAAAGGCCGTTCTGTAATTACTGGTCAAGGATATACTACTTCTGTTGACCTTGGTATTAGACGTACACCACAAGCCTGGGGACAAGCTATAATTCGAGTAGGTAATGCCGAGCGCGGCGATGGGCCTGTAGGTATTTTTGAATTCCATTCGTCTGGACTATTCTATAGCCCTACTTTGATTCAAACTCCTGCAATCGGTGTTGGTACTGTTAACGGACTTGGCACTCCGAGTATCGCCATCGGTGACAACGATACAGGCTTATCACACGGTGGTGATGGTCGAATTAACATGGTTGCCAATAGTATACATATTGCAAGCTGGGGCGCAGGCTATCAATCTCATCCTGGACTTTGGGATTCAACTGGTGCTTTTTGGACAGAAACCGGAAGAGCTATCGTTTCTCATGGTCATTTAGTTCAGGCGAATGACAGCTATTCAACGTATGTCCGTGATGTTTATGTCCGCTCTGATATTCGTGTTAAAAAGAACCTCGTTAAATTTGAAAATGCTTCTGAGAAGCTTTCTAAAATTAACGGTTACACTTATATGCAGAAACGTGGAACAGATGAAGAAGGTAATCAGAAATGGGAACCTAACGCTGGTTTGATAGCTCAAGAAGTTCAAGCTATTTTACCAGAATTAGTTGAAGGCGACCTGGATGGTGAAGCTTTACTTCGTTTGAACTATAACGGTGTAATTGGTTTAAATACAGCTGCAATCAACGAGCATACTGCAGAAATTGCAGAACTTAAATCAGAGATTGAAGAGCTTAAAAAATTAGTTAAATCATTGTTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c8a72f4d18840c79522d9fa8ec92007e9e0a598d10dec5ad17e5b2ef850b1086
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5392
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome sequences of avian pathogenic Escherichia coli bacteriophages UPEC01, UPEC03, UPEC06 and UPEC07 Kazibwe,G., Hinkley,T.C., Le Ny,A.-L.M. and Nakavuma,J.L. 2022-03-17 — GenBank