Protein

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Genbank accession
QMS41870.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,53
Protein sequence
MIATEMVHKYLGNGVFEDTMTPNTQAVQSLIRLARDPDVGGLNLTVRNMDKLLAVQNEVEAYFGDKQAGEFCYTFDDYKTTMQDIVSTIADAIFCTPYRRGADILLDFERPRMGPEMVFTHRSKAGTSEKWTRTFNDSQVFDSLKFSYIDPKTNVKETITIPETGGLKTETYDSKGIRNYKQAFWAANRRHQKNILKKISVSFSATEEGIFALPNRAVSVVKGSRMSTYDGYVTAVNGLTVELSQPVKFTSGDDHYLVLKLRDGGVQSVRVVPGAHDRQVIMTSVPQEAIYTGNSALKTEFSFGNEARHNAQMILVSTVDPGDDRTVKITGFNYDKDFYKFDNVQPFGRAFSNGFDNGFN
Physico‐chemical
properties
protein length:360 AA
molecular weight: 40370,95920 Da
isoelectric point:6,33683
aromaticity:0,10833
hydropathy:-0,41833

Domains

Domains [InterPro]
NF040662
Unmapped
1–340
NF040662
DC_0016
STR
1–360
DC_0016
QMS41870.1
1 360
Architecture
STR
STR 1-360
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QMS41870.1
1 360
Domain Start End Length (AA) Confidence
N-terminal 1 206 206 0,6042
Central domain 207 349 144 0,4544
C-terminal 350 360 10 0,0721
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-206
Central
207-349
C-terminal
350-360

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage S55
[NCBI] 		2759178 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella pullorum
[NCBI] 		605 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QMS41870.1 [NCBI]
Genbank nucleotide accession
MT653137.1 [NCBI]
CDS location
range 41694 -> 42776
strand -
CDS
ATGATTGCCACCGAAATGGTACACAAATACCTTGGTAACGGTGTTTTCGAAGATACGATGACCCCCAATACCCAGGCCGTGCAATCTCTTATCCGCCTGGCGCGTGATCCGGATGTGGGGGGTTTAAACCTGACGGTACGCAACATGGATAAGTTACTTGCCGTGCAGAACGAGGTCGAAGCGTATTTCGGTGACAAACAGGCGGGGGAATTTTGCTACACGTTTGATGACTATAAAACCACCATGCAGGACATAGTTAGTACTATAGCAGACGCCATATTCTGCACCCCATATCGGCGTGGGGCGGATATCCTTCTCGATTTTGAGCGCCCCCGCATGGGTCCTGAGATGGTGTTCACCCACCGAAGCAAGGCCGGTACTTCTGAAAAGTGGACCAGAACATTTAACGATTCTCAGGTTTTTGACAGCCTTAAATTCTCGTACATAGACCCTAAGACGAACGTCAAAGAGACTATAACCATACCCGAAACCGGAGGCCTTAAAACGGAGACCTACGATTCAAAAGGTATTCGCAACTATAAGCAGGCTTTCTGGGCGGCAAACCGTCGTCATCAGAAAAACATATTGAAGAAGATTTCAGTGTCTTTTAGTGCCACTGAAGAAGGAATCTTTGCCCTTCCGAATCGTGCCGTTAGTGTGGTTAAGGGTTCGCGTATGTCTACTTACGACGGCTACGTAACCGCGGTTAACGGTCTTACCGTAGAGCTATCCCAGCCGGTTAAGTTCACATCCGGAGATGACCATTATTTGGTTCTTAAGCTGAGAGATGGCGGCGTCCAAAGTGTTCGCGTTGTCCCTGGTGCACACGACCGACAAGTAATTATGACTTCTGTACCGCAGGAAGCCATTTACACGGGTAATAGCGCCCTGAAAACTGAATTTTCATTCGGCAACGAAGCAAGGCATAATGCTCAGATGATTCTTGTTTCTACAGTAGACCCAGGCGATGACAGAACAGTCAAAATAACCGGGTTTAACTATGACAAGGATTTCTATAAGTTTGACAACGTACAGCCTTTCGGTCGTGCGTTCTCTAACGGATTCGATAACGGTTTTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3121fbe9fc3f85d89405c8ea59179eabdc97f2192f08976c30cb4edbe162f133
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8906
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50