Protein

View in Explore
Genbank accession
GENB_89b98efa6004 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TSP
Evidence RBPdetect2
Probability 0,75
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSLQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYIVDNRPGDVLYTNVSPIDENSNLDLTSPNNVLYKYNSIEGGIIVPRGCSLVGTDLRRTKIIPKYVPYPTTFPAKGINTEAQVPPRTAIFKVTGGTYFWQFSFFDGAEEGVYFKPDSVETLAPKFSHHRLTCFEFADGLNTLSTLIANGTVPNSDYSAVPNILERTDLEIYYQKVSKAFATIPDTSGDPATDQIQARVEENRIVGPISDEYRVLQITRNGQTATAVTVDEFGNPRDHGFSVGVNINISGVTGSTGTQSELDAGIYNGSFTVTSASGNLFTYQMSEEPTGNAVGSNITVKTEIDTVDSASPYAFNLSLRSVWGMNGMHADGAKATGFKSMVVAQFTGLSLQKDDRAFVRYNATTGNYDAAVAGDGAHLDGFAEYRKGWGHEHIKCSNDSFIQAVSVFAVGYAGHFTAVNGADMSITNSNSNFGNTALRSVGFKAKAFSKDKAGEITHIIPPKALGVISTTATGSNGGNSITLANDGSIEGVLEGMQVTGTNIGSGATVGSLNKTTRVVTLTVNNTGAVNGSVIFGEEVSVNWVNVDIQRTIDIGQSLAGQGILGGTRLYLFGYTSETSPPTSRVQGYTIGARQDGTGNSAVPDKLFIQLQNTSAQLATYSANIAPYGPSVSGLAAGAAGSPLQYDSNTYTVNGVSNTVGGWYITCDPANNAIYPILSSTNVNNIYQNLAFTPTSFIKRIPDSRDLQDRTYRVRYVIDKDKSNPLPRDPISGYVMQPLNSDTTNYNLNGVFYIYDIEVIQEFERGVNDGIYYLTLLYASVAPSTSNFDDRFFSQNVNEVYPTFDRDNPVGDPDSSVSVADNETIGLVYATDGATPTPNKDPKLSITKEAVEFLLTDTGWTQPGTTPGYASVNKTLSGTLLTARSGDEETRKINIRENNDGTVAPIPVELRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQIKFSQSIKEAAGVAFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVVGEEDTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGLVTATNNIQAKKLSYFNQDGTVVKQTLLAPEDANGQPSFTNITGYNTPADGDLVYNTNWTPGKSLGWIYSSGTWHEFGLTDTGEINIDTFNNTQHIGIGTAAVSGYRVDVDGNVHVSGNLVVDGRGGISAASYVTKTYTGDGNTLTFAISTYTGVQHTDDSVLVFLNGVAQIAGTNYTVDSNGANVVFSSGDAPLSTDTIHILELPI
Physico‐chemical
properties
protein length:1321 AA
molecular weight: 141810,08800 Da
isoelectric point:4,72022
aromaticity:0,09463
hydropathy:-0,22634

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_89b98efa6004
1 1321
Domain Start End Length (AA) Confidence
N-terminal 1 89 89 0,9486
Central domain 90 303 215 0,9494
C-terminal 304 1321 1017 0,1094
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-89
Central
90-303
C-terminal
304-1321

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage MS29
[NCBI] 		2995680 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
cdf62388fe9af6423c4e21e1887d75cc93e73d12411ddc2c5f013ae8cbcda7f2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3647
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50