Protein

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Genbank accession
QZI86558.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MADKILPAAQQYLNDTKVINQAYLVAIELPGQTGSFLTLTNYSRDITYLGVPYQTGTLKKVTNVTRTATLTSNAVSIHLSGVPQAEVDRALNSDSYLERVIRIYKVVIKEDGSLLEFYDDGSTFLLFEGKITDVSLKETGANTSKGTSEVTWKCAGAFYELDRVNGRITDDESHRGLITDSNGNLVPSNGAKKFEYQQDKGFFHSNQSIDILASYQTEEKRYKVKTSKSWGGLKTDVDMIEYYETVTREVDIRFNLAAKYIPVVYGVQKVQGIPVFADIIADNPDRIYVVYAFCEGEIEGFLDFYIDDNPIICYDSIDQGDRVCFGSRRDSGDTLGTTAVAGGEGPNGATVHGEQYNYDDGNGEIKFWVYHGKNDQTASPRMVGLAAANRFLGQTGAYGPSYGPEYWDADFKLIDTAYVVVEFNITDERSDVPTIHADIRGKKVSVYDDNGLVSSDETSLNPAWQKLDYIRSPIYGVGIPFDRIDLDSFIETADLFNVLDTTYDPDWVPFWRYLGWNEQWQEFRYVMQTNVLLDTANTLFKNTETMLNQSICALNIVNGKYTLTAEAESQDAIIIPEEDIVSGNIQISDVTSKNKYNTVVASIVDPGLGWANNTITFFDGEYLAEDENVERKLNLAFPYITNYYTARALCERELRKSRFNREVKITLPYKYLDLPINRPVKLSKERFGWDNKDFLLRSVTFLPNGNSEVTLREYSEGVFINSPKSDNSDNQNPKPENLVKPPRNFRYLPATQDGDEGTIGKNGELRWEPSLTNDVTYYSIRISGQIDPVTVAVDSIDKALGYLFAELYGYDAGTYTFECRAVAGARGRSSSPATIIIDVDPSKNLPKVTNLRITNTANNSDFVWLGPEPILAWDPLPDGFLPVGTESYLIDIIDPDTDGIISQYQTSSLTLNYPFTENKTQYFNLKGEVGVFRSLDVRIKAAGQTGELSVDWTYL
Physico‐chemical
properties
protein length:955 AA
molecular weight: 107084,11370 Da
isoelectric point:4,62268
aromaticity:0,11414
hydropathy:-0,37529

Domains

Domains [InterPro]
DC_0187
STR
227–952
DC_0187
IPR032876
ATT
572–674
IPR032876
QZI86558.1
1 955
Architecture
STR
ATT
STR
STR 227-571 | ATT 572-674 | STR 675-952 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QZI86558.1
1 955
Domain Start End Length (AA) Confidence
N-terminal 1 307 307 0,9851
Central domain 308 527 221 0,3261
C-terminal 528 955 427 0,0148
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-307
Central
308-527
C-terminal
528-955

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 70E38.1
[NCBI] 		2859293 No lineage information
Host Vibrio crassostreae
[NCBI] 		246167 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZI86558.1 [NCBI]
Genbank nucleotide accession
MW865327.1 [NCBI]
CDS location
range 17402 -> 20269
strand +
CDS
ATGGCTGATAAGATTTTACCTGCCGCGCAGCAGTACCTAAATGACACTAAAGTTATAAATCAAGCGTACTTAGTAGCTATTGAGCTACCTGGGCAAACAGGTAGCTTCTTAACTCTGACTAACTACAGTCGTGATATTACATACCTTGGTGTACCATACCAAACAGGCACGCTGAAAAAGGTAACTAACGTTACCAGAACAGCGACACTTACATCAAATGCAGTATCTATACACCTAAGCGGTGTGCCACAGGCAGAAGTAGATCGCGCATTAAATTCTGATTCTTATCTAGAACGTGTGATTCGAATTTACAAAGTAGTTATTAAAGAAGATGGATCGCTACTTGAGTTCTACGATGATGGATCTACCTTCCTATTGTTCGAAGGTAAGATTACAGACGTATCTCTTAAAGAAACTGGAGCTAACACATCTAAAGGTACTAGTGAAGTTACTTGGAAGTGTGCTGGCGCATTCTATGAGTTAGATAGAGTAAACGGACGTATTACGGATGATGAATCTCACCGTGGTTTAATTACAGATAGTAATGGTAATTTGGTTCCTTCAAACGGTGCGAAGAAGTTTGAATACCAACAAGATAAGGGATTCTTCCACTCTAATCAATCCATAGACATCTTAGCTAGTTACCAGACAGAAGAGAAGCGCTATAAAGTTAAGACTTCCAAGAGCTGGGGTGGCTTAAAGACTGACGTAGATATGATAGAATACTACGAGACAGTTACTCGCGAGGTGGACATCAGATTCAACCTTGCTGCAAAATACATACCAGTTGTTTATGGAGTACAGAAAGTTCAAGGTATCCCGGTCTTCGCGGACATTATAGCTGATAACCCTGATAGAATATACGTTGTTTACGCGTTCTGTGAGGGAGAGATTGAAGGATTCCTAGATTTCTATATAGATGATAACCCAATTATCTGTTACGATAGTATTGACCAAGGAGACCGCGTATGTTTCGGTAGCCGTAGAGACTCTGGTGATACTCTTGGCACTACAGCAGTGGCAGGCGGAGAAGGACCTAATGGTGCTACCGTACACGGGGAGCAATACAACTACGATGACGGTAACGGTGAGATAAAGTTCTGGGTGTATCATGGTAAGAATGATCAAACAGCATCACCACGTATGGTAGGATTAGCTGCAGCTAACAGGTTCCTAGGGCAGACAGGGGCTTACGGTCCTAGTTACGGTCCTGAGTATTGGGATGCTGATTTCAAACTTATCGATACAGCGTATGTAGTAGTAGAGTTTAATATCACGGACGAGAGATCAGACGTTCCAACTATCCATGCGGATATTCGTGGTAAGAAGGTAAGTGTGTACGACGACAACGGTTTAGTAAGCTCTGATGAGACTTCACTCAACCCAGCATGGCAAAAGCTGGACTATATTCGTAGTCCTATCTATGGTGTGGGTATCCCGTTTGATCGTATAGACTTAGATTCCTTCATAGAAACGGCAGACCTATTTAATGTACTAGATACTACATATGATCCAGACTGGGTGCCTTTCTGGAGATACTTAGGTTGGAATGAGCAGTGGCAAGAGTTCCGCTACGTAATGCAAACCAATGTTCTGCTTGATACAGCTAATACCCTATTCAAGAATACCGAAACGATGCTAAACCAATCAATTTGTGCCTTGAACATTGTAAATGGTAAATATACACTTACCGCCGAGGCTGAATCACAAGATGCCATTATAATACCAGAAGAAGATATTGTATCTGGTAATATACAGATATCTGATGTTACGTCAAAGAACAAGTACAATACCGTGGTGGCTTCAATAGTCGATCCTGGACTTGGTTGGGCTAATAATACAATCACGTTCTTCGACGGAGAATATCTAGCAGAAGACGAGAACGTAGAACGTAAGTTGAACCTAGCATTCCCATACATCACTAACTACTACACAGCTAGAGCACTATGTGAGCGAGAGCTGAGAAAGTCTAGGTTTAATAGAGAAGTGAAGATTACTTTACCTTATAAGTATTTAGACCTACCTATAAATCGACCAGTTAAGTTATCCAAAGAGAGATTCGGATGGGATAATAAGGACTTCCTACTACGTAGCGTAACCTTCCTTCCTAACGGTAACTCAGAAGTAACCCTACGTGAGTACTCTGAGGGCGTGTTTATTAACTCTCCTAAATCAGATAATAGTGATAATCAGAATCCTAAGCCTGAAAACCTAGTAAAACCACCACGTAACTTCCGCTACCTACCTGCTACTCAGGATGGTGACGAGGGTACAATTGGTAAGAACGGTGAATTACGCTGGGAGCCTAGTTTAACTAATGATGTAACCTACTACTCCATTCGTATATCGGGACAAATAGATCCAGTTACCGTAGCGGTTGATTCTATTGATAAAGCTTTGGGATACCTATTTGCGGAACTATACGGGTACGATGCAGGAACATATACTTTCGAGTGTAGAGCAGTTGCTGGCGCACGTGGACGATCTTCTTCCCCTGCTACTATAATAATAGACGTAGATCCCTCCAAGAACCTACCTAAGGTAACAAACTTACGAATTACCAATACAGCAAACAACAGTGATTTTGTATGGTTAGGTCCGGAACCTATTCTAGCTTGGGATCCTTTACCTGATGGTTTCTTACCTGTAGGTACAGAATCTTACCTAATAGACATTATAGACCCAGACACTGACGGTATAATTTCGCAATATCAAACTTCAAGTCTTACATTGAACTACCCGTTCACTGAAAACAAGACTCAATACTTTAACCTCAAAGGAGAAGTCGGTGTATTCCGCTCCCTTGATGTCAGGATAAAAGCTGCCGGACAAACTGGTGAGCTATCCGTTGATTGGACTTACTTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
c41c4b4a58676af9e98914312c7eeeaa8fbbff0014c08dfab1f861b102ebcbe6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2787
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Rapid evolution of virus immunity in the wild Piel,D., Bruto,M., Labreuche,Y., Blanquart,F., Chenivesse,S., Lepanse,S., James,A., Garcia Cruz,R., Dubert,J., Petton,B., Lieberman,E., Wegner,M.K., Hussain,F.A., Kauffman,K.K., Polz,M.F., Gandon,S., Bikard,D. and Le Roux,F. 2024-02-09 — GenBank