Protein

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Genbank accession
YP_009005533.1 [GenBank]
Protein name
tail fiber protein proximal subunit
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,67
Protein sequence
MADSIKRKFRGADGFDAAGEKIVNVATADRTVLSDGVNVEFLIQENTLQQYDSTRGYTSGFAVIYDNRIWVSNRDIAKPACAFNELYWTSVRTDAKWRVVSSGTTILKSGEFISVDTAKGNDMIFTLPNNPQDGDTIMLKDIGNKTGTVGVTINASIQDIVLRGPTNKVRSVKMTHPLSQYVFVFSNRLWNLYVSDYERVARIVTPSAVVQAQSNDFIVRRYTSPDPIRVTLPKHANTGDIINFTDLDGKNPQFHMIVSTFDDNTNIGTVGQKSIEVRTSGDGFIVYDESESIWRIWEGDLRPRMRVITDNVTLIPNEVVTVFGVNNSTQKTIDITLPTDIAIGDTVTIAMNYMRKGQKVNIRAATGDKIASSLQLLQFPKRSEYPPDTTWVMNDVLTFDGTTSYVPVLQLSYIEHAGSKYWIVADNDPTVERVDSKDNETRKRLGVIALASQDQANVDHENNPEKELAITPQTLANRVATKVRRGIARLVTLTEIQALTPGPHLDDVIVTPAMLNEKTATETRRGVAETATQAEANGSTDDERIITPKKLHNRIASEILTGILKLVRTTGTLAGIGRDTKGTNVYDYDNNIDAVTPKSLFQFKSTEQAQGGVYLATQNEVIAGGPAQPGFPVVVTPQTLHGKTSTDSRIGLIQIAKQAEVDTGTDYTKAVTPKTLNDRKAREDLSGIAEIATQVEFDTGTDDTRIVTPLKVKTRFNSTDRTSVVALSGLVEQGTLWDHYTLDIKEASETQRGTAALATQVQVDAGTDDKTIVTPKKLHAKKATETTEGIIQVANQAETVAGTIANKAVSPKNFKYVVQEEKTWESTIAQRGFVKLSEKALTFKGDTLNGSGRLLPGDLINEPALTDLPKEGYAVSPYEMNRALQYFLPAKAKAVDSDLLDGIDSTQFVRRDIDQVVNGKITFKKDVTLEAPLVSSSTAKFTTVNATISVDIGDTLGNSRINLNTLANGWNIETLANGSTLDFTATDKVLTLNRNGNVTVAQTLTAMNKVDANKGFSVEGGTMVINPSSTEIVIGTQSKQVTLQNKDAKTFSVVDPSGTYTILNTKNAFEITAQGFVKKAGDSMTGPLQIQAPLTVQIPEGRVAPDVKPSDDNPASWSASITSAAIYNKLPGYGVPVMEKDAEGQDTGFVDHYEYVKGPGVLTQHGIGKTAVYQIWAPRPTAQELNHNAQTFWIRNFNIVTGEWDEFGKMYTSVQRPTAGEIGAVSTSGSAFNNLTIRDWLQIKNVRIVPNETTRTVDFIWVDE
Physico‐chemical
properties
protein length:1264 AA
molecular weight: 138202,72800 Da
isoelectric point:5,53523
aromaticity:0,06883
hydropathy:-0,32286

Domains

Domains [InterPro]
DC_1986
ATT
13–136
DC_1986 DC_1209
IPR048391
ATT
1116–1211
IPR048391
YP_009005533.1
1 1264
Architecture
ATT
STR
ATT
STR
ATT 13-136 | STR 345-1115 | ATT 1116-1211 | STR 1212-1254 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009005533.1
1 1264
Domain Start End Length (AA) Confidence
N-terminal 1 978 978 0,9131
Central domain 979 1177 200 0,2282
C-terminal 1178 1264 86 0,3454
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-978
Central
979-1177
C-terminal
1178-1264

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage PG7
[NCBI] 		1455074 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Karamvirus
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009005533.1 [NCBI]
Genbank nucleotide accession
NC_023561 [NCBI]
CDS location
range 155348 -> 159142
strand +
CDS
ATGGCAGATTCAATCAAACGCAAGTTTCGTGGCGCTGACGGCTTCGATGCTGCGGGTGAAAAAATAGTCAACGTTGCTACTGCTGACCGCACGGTGTTATCCGATGGCGTCAACGTTGAATTCCTTATCCAAGAAAACACATTACAACAGTATGATTCTACTCGTGGTTACACTTCCGGTTTCGCAGTAATTTACGACAACCGCATTTGGGTTTCAAATCGTGATATTGCAAAACCTGCCTGTGCATTTAATGAGCTTTATTGGACTTCGGTTCGTACCGACGCAAAATGGCGTGTAGTTTCAAGCGGAACAACAATTTTAAAATCAGGTGAATTTATTTCTGTCGATACCGCAAAAGGTAATGACATGATTTTCACTTTACCAAATAATCCGCAAGATGGTGATACAATTATGCTGAAGGATATCGGTAATAAAACCGGTACCGTTGGTGTAACTATCAACGCATCTATTCAAGACATTGTGTTGCGTGGCCCTACGAATAAAGTTCGCTCAGTCAAAATGACTCATCCACTGTCTCAATATGTGTTTGTGTTCAGCAATAGATTGTGGAATCTTTACGTTTCTGATTACGAACGAGTTGCTCGTATTGTAACACCAAGCGCAGTTGTTCAAGCTCAATCTAACGACTTTATAGTTCGCAGATATACTTCTCCAGACCCAATCCGCGTTACTTTGCCTAAACATGCAAACACTGGAGATATCATCAACTTTACTGACCTTGATGGAAAGAACCCTCAATTCCATATGATTGTTAGTACTTTCGATGATAACACCAATATCGGTACTGTTGGTCAAAAATCTATAGAGGTTCGTACTTCTGGTGACGGATTCATTGTATATGATGAATCAGAGTCAATCTGGAGAATCTGGGAAGGCGACTTACGTCCGCGCATGCGTGTGATCACCGACAACGTAACTTTAATTCCAAACGAGGTTGTTACTGTTTTTGGTGTAAATAACAGCACTCAGAAAACTATTGATATAACTTTACCTACTGATATTGCTATTGGCGATACTGTCACTATTGCAATGAATTATATGCGCAAAGGACAGAAAGTAAATATCAGAGCAGCTACTGGAGATAAAATTGCTTCAAGTCTTCAATTACTGCAATTCCCTAAACGCTCAGAGTATCCGCCTGATACCACTTGGGTAATGAATGATGTTCTTACTTTTGATGGTACTACTTCTTATGTTCCAGTATTGCAATTATCTTATATTGAACATGCTGGAAGTAAATACTGGATTGTTGCTGATAATGATCCGACCGTAGAGCGTGTTGACTCTAAAGATAACGAAACTCGTAAACGTCTTGGTGTTATTGCATTAGCAAGTCAAGACCAAGCAAACGTTGACCACGAAAATAATCCAGAAAAAGAGTTAGCAATTACTCCTCAAACTCTGGCAAACCGCGTTGCTACTAAAGTTCGTCGTGGTATTGCTCGTTTAGTTACTTTAACTGAAATCCAAGCTCTAACTCCTGGGCCGCATTTGGATGATGTTATTGTCACTCCTGCGATGCTGAATGAAAAAACAGCAACAGAAACTCGTCGTGGTGTTGCTGAAACTGCTACTCAAGCTGAAGCAAATGGTTCAACCGACGATGAACGTATCATCACTCCGAAGAAGCTGCATAACCGTATTGCTTCTGAGATTTTGACTGGTATTCTTAAATTAGTCAGAACGACTGGAACTCTTGCGGGTATTGGACGTGATACTAAAGGTACTAACGTTTATGACTATGATAACAACATTGATGCGGTAACTCCAAAATCACTGTTCCAATTCAAGTCTACTGAGCAAGCTCAGGGCGGCGTTTATCTTGCTACTCAAAATGAAGTAATTGCCGGTGGTCCAGCTCAACCTGGTTTCCCAGTAGTTGTTACTCCACAAACACTTCATGGTAAAACTTCAACTGATTCAAGAATCGGTTTGATTCAAATTGCTAAACAAGCTGAAGTAGATACTGGTACAGATTACACAAAAGCAGTTACTCCTAAAACTCTGAATGACCGTAAGGCTCGTGAAGATTTAAGTGGTATTGCTGAAATTGCAACTCAAGTTGAATTTGATACCGGAACGGACGATACACGTATCGTAACTCCATTAAAGGTTAAAACTCGTTTCAATTCAACCGATAGAACATCTGTTGTTGCTCTGTCTGGATTAGTTGAGCAAGGAACCTTGTGGGACCATTATACATTAGATATCAAAGAAGCATCTGAGACTCAGCGTGGTACTGCTGCTCTGGCCACTCAGGTACAAGTTGATGCTGGTACTGATGATAAGACGATTGTTACGCCTAAGAAATTGCATGCTAAGAAAGCTACTGAAACTACCGAAGGTATTATTCAAGTTGCTAACCAAGCTGAAACGGTAGCCGGTACTATTGCTAATAAAGCAGTTTCTCCTAAGAACTTTAAGTATGTTGTCCAAGAAGAAAAAACTTGGGAATCTACTATAGCTCAGCGTGGTTTCGTTAAATTATCAGAAAAAGCACTCACCTTTAAGGGTGATACTTTAAATGGTTCTGGTCGTCTGCTTCCAGGTGATTTAATTAACGAACCCGCTTTAACAGATTTGCCTAAAGAAGGTTATGCAGTATCTCCATACGAGATGAACCGTGCTCTGCAATACTTCTTGCCGGCTAAAGCAAAAGCTGTTGATTCGGATTTACTGGATGGAATTGATTCAACTCAGTTTGTTCGCCGCGATATCGACCAAGTAGTTAATGGCAAAATTACATTCAAAAAGGATGTTACTCTAGAAGCTCCTCTGGTGTCCTCTAGTACGGCCAAATTCACTACCGTGAATGCTACTATATCTGTTGATATTGGTGACACCCTGGGTAATTCTAGAATCAATTTGAATACTCTGGCGAATGGCTGGAACATTGAAACTCTGGCGAATGGTTCAACTCTTGATTTTACTGCTACAGATAAAGTTCTGACGCTTAATCGTAATGGAAACGTAACGGTTGCTCAGACTCTGACAGCAATGAACAAAGTTGACGCTAATAAGGGCTTTTCAGTTGAAGGTGGTACAATGGTTATCAATCCTTCCTCTACTGAAATTGTCATTGGTACTCAATCTAAGCAAGTAACATTGCAGAACAAAGATGCTAAGACATTCTCAGTTGTAGACCCTTCTGGCACTTACACCATTCTGAATACCAAGAATGCTTTTGAAATAACGGCTCAAGGGTTCGTTAAGAAAGCAGGTGATTCAATGACTGGGCCACTTCAAATTCAAGCTCCATTGACTGTTCAGATTCCTGAAGGACGAGTTGCTCCTGATGTTAAACCATCAGATGATAACCCAGCTTCATGGTCTGCATCAATTACCTCAGCAGCAATTTACAATAAATTGCCTGGCTATGGTGTTCCAGTTATGGAAAAAGATGCTGAAGGACAAGACACCGGTTTCGTAGACCATTACGAATATGTTAAAGGTCCTGGTGTATTAACTCAACATGGTATTGGTAAGACTGCGGTCTATCAAATTTGGGCGCCTCGCCCAACTGCGCAAGAGTTAAACCACAATGCTCAGACTTTCTGGATTCGTAACTTCAACATCGTCACTGGCGAGTGGGACGAATTTGGTAAGATGTACACCTCAGTTCAGAGACCTACTGCAGGGGAAATTGGTGCTGTATCAACTTCTGGTTCAGCTTTCAATAACTTGACAATTCGCGATTGGTTACAGATTAAGAACGTTCGTATTGTTCCTAATGAAACTACTCGTACTGTTGACTTCATATGGGTTGATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ba6fd989c577962b016d5419226ddb848d4d0f2fb2cf5420c4df477ffa5399fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5393
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of a Potential Antibacterial Agent, phage PG7, for the Treatment of Enterobacter cloacae Infection in Mice Wang,S.W., Jin,J., Chen,S.J., Zhang,G., Li,Z.J., Li,Y.H., Wang,X.T., Wang,J., Wang,S.M., Wang,Z.Q. and Zhao,G.Q. 2018-02 — GenBank