Protein

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Genbank accession
AUR89374.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect2
Probability 0,81
Protein sequence
MSSLNDLLGAATQQESGTGVTESGAVVIGSTTAGESTEIKTSSGDTVVTVTDDGGFQLSESQVVRQIVNAINTSADDNDMKLPTVQAIMSFMAGAVTATIDFKNLTSKAAFDAFISGGGFVPTIAFVTDTTPFDYTDNTGHAGTDLEWMFVVCVEEDGVITTSMVNNSDITNLTGAEVVSIIEATEDVNFVNDSDLSRIQNLPDNTADALGGKVDSEVGKGLSQNNFTDVQRNKVDNSPSDTNAALGGKLDKQSTGVNVRVTNTGTGSGSYELENTAADLDERLWRIKPKTDGSTVIEALDDGGDVTETFEFDQSGAFKAKTIKQNNYSVVATNDPMYVLLSALFGIGSLTQDMVLQSDSGSVITLKVADNADSNGVAWQNTGASYTMSVRRASVGSFTSDLVVSMGLDNDVDQLMEVMRVRCDDGDSDTRLSLMVKALHSQEEITSNGNVLITSKNRGIQRDTVTYKSSHPTISAITLAAYFAAEAEVEFLGTSSGSINMPVISTDPASDEVQAGTEISFCNFNSGSSADTTLVAPDSDHVFMVGNVGNVFTGSTIIQNASQVRIKARDYRSYSGIGKMCYVVVSA
Physico‐chemical
properties
protein length:587 AA
molecular weight: 61913,52190 Da
isoelectric point:4,20719
aromaticity:0,05963
hydropathy:-0,14055

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.122.B._10N.286.46.F8
[NCBI] 		1881250 No lineage information
Host Vibrio cyclitrophicus
[NCBI] 		47951 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR89374.1 [NCBI]
Genbank nucleotide accession
MG592497 [NCBI]
CDS location
range 11977 -> 13740
strand +
CDS
ATGAGTAGTTTAAATGACCTTCTAGGCGCAGCAACGCAACAAGAGTCCGGAACTGGGGTTACTGAGTCCGGGGCAGTGGTGATCGGTTCGACTACAGCCGGAGAGTCGACAGAAATAAAAACAAGCTCAGGTGATACGGTTGTCACTGTTACTGATGACGGAGGCTTTCAGCTTTCTGAGTCTCAAGTAGTTAGGCAGATTGTTAACGCGATCAATACCAGCGCCGACGATAACGATATGAAGCTTCCAACGGTTCAAGCTATTATGTCGTTCATGGCTGGTGCTGTAACGGCAACGATTGATTTTAAAAACCTAACAAGCAAGGCGGCATTTGATGCATTTATCAGTGGCGGCGGTTTCGTTCCAACTATTGCCTTTGTGACTGATACTACCCCGTTCGATTACACCGACAACACCGGACACGCTGGAACCGATCTTGAGTGGATGTTTGTCGTCTGCGTCGAGGAAGATGGTGTAATTACAACCTCAATGGTTAACAACAGTGACATTACAAACCTTACGGGCGCTGAGGTTGTAAGCATTATCGAAGCAACTGAAGACGTTAACTTTGTTAATGACTCTGATTTATCTCGAATTCAAAACCTACCAGATAACACAGCTGATGCTTTGGGCGGCAAGGTTGACTCAGAAGTTGGTAAGGGGCTGTCGCAGAATAACTTCACAGATGTGCAGCGCAATAAGGTTGACAATTCACCGTCCGACACTAACGCGGCTCTAGGGGGCAAACTAGACAAGCAAAGCACTGGCGTAAATGTTCGGGTAACAAACACAGGAACAGGTAGCGGATCGTATGAGCTAGAAAATACAGCAGCGGATCTAGATGAACGGTTGTGGAGGATAAAACCAAAAACCGACGGATCAACAGTAATAGAGGCGCTTGACGACGGTGGTGATGTTACTGAGACATTTGAGTTTGACCAGTCGGGTGCGTTTAAAGCTAAAACGATAAAGCAAAATAACTACTCAGTTGTCGCAACTAATGATCCGATGTATGTTCTTTTGTCCGCATTGTTTGGTATTGGTTCGCTAACTCAAGACATGGTTTTACAGTCTGATAGCGGTTCAGTGATTACGCTTAAAGTTGCTGATAACGCGGACTCCAACGGCGTAGCTTGGCAAAACACCGGAGCTTCTTACACGATGAGCGTTAGACGCGCCTCTGTTGGCTCGTTCACGTCTGACTTGGTTGTCTCGATGGGGCTTGATAATGACGTAGATCAGCTAATGGAAGTAATGCGCGTTCGATGTGATGATGGTGATAGTGACACACGACTTTCACTCATGGTAAAAGCGCTTCACTCTCAAGAGGAAATTACATCAAATGGTAATGTCCTAATCACCTCAAAAAACCGTGGCATACAGCGCGATACTGTGACGTACAAAAGTAGTCACCCAACAATTAGCGCAATTACTCTTGCGGCATACTTTGCGGCTGAAGCTGAGGTTGAGTTTCTTGGCACAAGTTCAGGCTCAATTAACATGCCTGTAATTTCAACTGACCCAGCGAGTGATGAAGTGCAGGCGGGCACTGAGATTAGTTTCTGTAACTTTAACTCTGGCTCGTCGGCAGATACGACGTTGGTCGCTCCAGATTCTGACCACGTGTTTATGGTTGGTAATGTAGGCAATGTATTTACAGGCTCAACTATCATCCAGAATGCTAGTCAAGTTCGAATTAAGGCGCGAGACTATAGGAGTTATAGCGGCATAGGAAAGATGTGTTACGTGGTAGTTTCAGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3c124ba124eb27beceb650f12065df757ac32417ba494f7f628be9cde5148b86
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6314
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank