Protein

View in Explore
UniProt accession
A0A1Z1LW80 [UniProt]
Protein name
Uncharacterized protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TSP
Evidence RBPdetect2
Probability 0,78
Protein sequence
MSLTRLKNIITSRTGRIIYVNPDDFDASDAIDNRGNSALRPFKSIQRAFLEVARFSYRVGLSNDEFDAFSIMLYPAEYVVDNRPGDVLYTNVAPIDENSNLDLTSPNNVLYKYNSVEGGIIVPRGCSLVGTDLRRTKIIPKYVPYPTILTSKGINTEDQSPSRSSIFKVTGGTYFWQFSFFDGAEEGVYFSPNSTETIAPKYSHHKLTCFEFADGLNPLSTLISNGTVPEGDYSAVPNILERTDLEIYYQKVSKAFATIPDTSGDPATDQIQARVEENRIVGPISDEYRILQITRNGNTATAVTVDEFDNPRDHGFSVGVNINVSGVTGSTGPQSELDASSYNGSFTVTSASGNVFTYQMQQEPTGNAVGTNISVKTEIDTVDSASPYAFNLSLRSVWGMNGMLADGSKATGFKSMVVAQFTGLSLQKDDRAFVRFNASTGNYDTATAGDGAHLDGFAEYRKGWAHRHITCSNDAFIQAVSVFAVGYGTHFTAESGADMSITNSNSNFGNTALRSAGFKAKSFSKDKAGEITHIIPPKALSVISTTATGASGQASITLANDGSVEGVLQGMPVTGTNIGSGAVVTTINTNTRVVTLSAVNTGTVNGNVIFGDEISVNWVNVDIQRTKVINATLAGQGISPGTRLYLYGYTVETSPPTTRVQGYTVGARQDGTGVSAVADKLNCLLVAQGATEATVQSASITPYGPSVSGLDAGVAGSPLQFDSNTYTINGVTNQTGGWYLSVDPTTNEIYTTLSNNTQYNNVSFTPTTFLKRIPDSRDLQDRTYRVRYVIGKDKSNPLPRPPISGYVVQPLNTDATNYGLNRCFYIYDIETVQEFERGISDGIFYLTLLCASITPSTSNFNDRKFSQNVNEVYPTFDRDNPLADPLASISVADNETIGLVYSTDGANPTPNKDPQRSITKEAIEFLLSDGGWAQPGTTPNYDSVNERLSGIRLTARAGTEEVRKINIRQNNDGTVAPIPVETRRHSILRSGNHTFEYLGFGPGNYSTAFPQTQVETLSADQVKFSQSIKEEAGVAFYSGLNSNGDLFIGNQVINPVTGQITNEDIAQLNVIGEENTTIETFSELVLTDKLTVIGGASNQLESIFAGPVTFQGQTTFTDNITVKKLTYNNQDGTVIKQTLLAPADALGQPNFANITGYTTPADGDLVYNINWTPGKSLGWIYYNGVWKEFGLTDIGEINIETFNNTQHFGIGTAANSNYRVNINGSTRVDGNLVVTGRGAVGPDKYVTRTYAGDGNALTFAITTYPNSGIQHADDSCLVFLNGVAQIAGTDYTVDSNGANIVFTTAPTNTDTLHIIELPI
Physico‐chemical
properties
protein length:1319 AA
molecular weight: 142139,58530 Da
isoelectric point:4,81042
aromaticity:0,09249
hydropathy:-0,26171

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A1Z1LW80
1 1319
Domain Start End Length (AA) Confidence
N-terminal 1 90 90 0,9618
Central domain 91 307 218 0,9487
C-terminal 308 1319 1011 0,0686
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-90
Central
91-307
C-terminal
308-1319

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-H35
[NCBI] 		1983572 Uroviricota > Caudoviricetes > Pantevenvirales > Shandvirus > Shandvirus sh35
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARW56924.1 [NCBI]
Genbank nucleotide accession
KY945241 [NCBI]
CDS location
range 27276 -> 31235
strand -
CDS
ATGTCTCTAACTAGACTTAAGAATATTATTACGTCCCGCACGGGACGTATCATTTACGTCAACCCAGATGACTTTGATGCTTCTGATGCTATTGACAATAGGGGTAACTCTGCACTGAGACCCTTTAAGTCTATTCAGAGAGCATTTCTTGAGGTTGCTAGATTTTCGTATCGAGTAGGTCTGTCAAACGACGAATTTGACGCCTTCTCGATTATGCTGTATCCAGCAGAATATGTTGTAGACAACAGACCTGGCGATGTGCTATACACAAACGTAGCACCTATCGATGAAAACTCTAACTTAGACCTAACATCTCCCAACAACGTATTATATAAGTATAACTCTGTAGAAGGTGGTATTATCGTCCCCAGAGGTTGCTCTCTGGTTGGCACAGACCTTAGACGTACTAAGATCATTCCTAAGTATGTGCCTTATCCCACTATTCTTACCTCTAAAGGTATCAATACTGAAGATCAATCCCCCTCCAGATCATCAATCTTTAAGGTAACTGGTGGTACTTATTTTTGGCAATTCTCCTTCTTTGATGGTGCCGAAGAGGGTGTATATTTTAGTCCAAACTCTACTGAGACTATTGCACCTAAGTATTCCCACCACAAACTAACTTGTTTTGAGTTTGCTGATGGTTTGAATCCACTTTCCACCCTAATTTCTAACGGCACTGTTCCAGAAGGTGATTATTCTGCGGTGCCTAACATCCTGGAAAGGACAGACCTAGAGATTTACTACCAGAAAGTATCGAAGGCATTTGCTACAATTCCTGATACATCTGGTGATCCTGCAACTGACCAAATTCAGGCAAGAGTTGAAGAAAATAGAATCGTTGGTCCTATCTCTGACGAATATCGTATTCTTCAAATTACTCGTAATGGTAACACTGCAACTGCTGTTACTGTTGATGAGTTTGATAATCCAAGAGATCACGGATTCTCGGTTGGTGTTAACATTAACGTTTCTGGTGTTACTGGATCGACTGGTCCACAATCTGAGTTGGATGCATCATCCTATAATGGATCTTTCACGGTAACATCTGCATCTGGTAACGTATTTACCTACCAGATGCAACAAGAACCAACGGGTAATGCTGTTGGCACAAATATCTCCGTTAAGACTGAGATTGATACTGTTGACTCTGCATCGCCATATGCATTTAACCTGTCACTGAGAAGTGTCTGGGGCATGAATGGTATGCTTGCAGATGGTAGCAAAGCAACAGGTTTCAAATCGATGGTTGTTGCCCAGTTTACTGGTCTATCTCTACAGAAAGATGATAGAGCATTTGTAAGATTTAATGCTTCTACTGGTAACTATGATACTGCAACTGCTGGTGATGGTGCTCACTTAGATGGTTTTGCTGAGTATCGTAAGGGTTGGGCACACAGACACATTACATGCTCTAATGATGCTTTCATTCAGGCAGTTTCGGTGTTTGCTGTTGGATACGGCACACACTTTACTGCTGAGAGTGGTGCTGACATGTCGATTACCAACTCTAACTCCAACTTCGGTAATACTGCACTTCGCTCTGCTGGTTTCAAGGCAAAATCATTCTCTAAAGATAAAGCAGGCGAGATCACACATATTATTCCACCTAAGGCACTTTCTGTCATCTCAACAACAGCAACTGGTGCAAGTGGTCAAGCATCTATTACACTTGCAAATGATGGTAGTGTTGAAGGTGTGCTGCAAGGTATGCCTGTAACTGGCACAAATATTGGATCTGGTGCTGTAGTTACCACTATCAATACAAATACTAGAGTTGTAACTCTAAGTGCAGTTAATACTGGCACGGTAAATGGTAACGTCATCTTTGGTGATGAAATCTCTGTCAACTGGGTCAACGTTGATATTCAACGCACTAAAGTAATTAACGCAACTCTTGCAGGTCAGGGTATTAGTCCTGGCACGAGACTATATCTCTATGGTTATACTGTAGAAACTTCTCCACCAACAACTAGAGTCCAAGGTTATACCGTTGGTGCTAGACAAGATGGCACGGGTGTTAGTGCTGTAGCAGATAAACTAAACTGCTTATTGGTTGCTCAAGGTGCAACTGAAGCAACAGTCCAATCTGCATCGATTACACCTTATGGTCCAAGTGTTTCTGGTTTGGATGCTGGTGTTGCAGGATCTCCACTACAATTTGATAGCAACACTTATACAATCAATGGTGTAACCAATCAGACTGGTGGTTGGTATCTGAGTGTAGATCCAACTACTAACGAGATTTATACAACATTATCTAACAATACTCAATATAATAATGTAAGTTTTACTCCAACAACATTCCTTAAGCGTATTCCTGACAGTAGAGACCTTCAGGATAGGACATATCGTGTCCGTTATGTTATTGGTAAGGATAAGTCCAATCCTCTTCCTCGTCCACCTATCAGTGGTTATGTTGTCCAACCACTTAACACTGATGCAACAAATTATGGATTGAATAGATGTTTCTACATTTATGATATTGAGACAGTCCAAGAATTTGAGAGAGGTATTTCTGATGGAATCTTCTATCTTACCCTGCTTTGTGCATCTATTACACCTTCGACTTCTAATTTCAACGACAGAAAATTCAGTCAAAACGTCAACGAAGTCTATCCTACGTTTGACAGAGACAACCCTCTTGCTGACCCTCTTGCTTCGATATCCGTCGCTGACAACGAAACTATCGGTCTAGTATATTCTACCGATGGCGCTAACCCAACACCAAATAAAGATCCTCAAAGATCTATTACTAAGGAAGCAATTGAGTTCTTATTATCTGACGGTGGTTGGGCACAACCAGGCACCACACCTAACTATGACTCGGTGAATGAAAGATTGTCTGGTATTCGACTCACTGCTCGTGCAGGCACTGAGGAAGTTAGAAAGATCAATATCCGTCAGAATAATGATGGCACTGTTGCACCTATTCCTGTTGAGACTCGTCGTCACTCTATTCTGAGATCTGGTAACCACACCTTTGAATATCTTGGTTTCGGTCCTGGTAACTATTCGACTGCATTCCCTCAGACTCAGGTAGAAACTCTAAGCGCAGATCAGGTTAAATTCTCTCAGTCTATCAAAGAAGAAGCGGGCGTTGCTTTCTACTCTGGTCTTAACTCTAATGGTGACCTATTCATTGGTAACCAAGTTATCAACCCAGTTACGGGTCAGATCACAAATGAAGATATTGCACAACTGAATGTCATTGGTGAAGAGAATACAACAATCGAAACATTTTCTGAGTTAGTCCTTACCGATAAACTCACAGTTATCGGTGGTGCATCTAACCAGTTAGAATCTATCTTCGCTGGTCCTGTTACCTTCCAAGGACAAACTACATTTACAGATAATATCACTGTAAAGAAACTGACTTACAACAACCAAGATGGTACTGTTATCAAACAGACACTTCTTGCACCCGCAGATGCACTGGGTCAACCCAACTTTGCAAATATCACAGGATATACAACTCCTGCAGATGGTGACTTAGTTTATAACATTAACTGGACTCCTGGTAAGTCTCTTGGTTGGATTTATTATAACGGTGTATGGAAAGAGTTTGGTCTAACTGATATTGGTGAGATCAACATTGAGACTTTCAATAATACTCAGCACTTTGGTATTGGCACTGCTGCCAACTCTAACTACAGAGTAAATATTAATGGCAGCACTAGAGTTGATGGCAACCTAGTTGTTACTGGTAGAGGTGCTGTTGGTCCCGATAAGTATGTCACTCGCACATATGCTGGTGATGGTAATGCTCTGACATTTGCTATTACAACTTATCCTAACAGCGGTATTCAACATGCTGATGATTCTTGCCTGGTATTCTTGAATGGTGTTGCTCAGATTGCTGGCACTGATTATACCGTAGACTCGAATGGTGCAAACATTGTATTCACAACTGCACCAACAAATACGGATACGCTTCATATTATTGAATTGCCTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8e0cc80ebde85b6b0fc88ba1339d982c7fd21875c48b0af966f3e1b1d3fdf594
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3761
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50