Protein

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Genbank accession
GENB_4a9fc8268e8e [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSVQKPKELVDTGVRGQEGTGDTLHDGGLKLNQDINSIWNVFGDYRIGKTSGFGNRVQTLHGTGYYQKHTRAYYAGAEQPSGNPVEFGSMHDLSVIRDGTGDLTITLPQGSGHGGECIEFVNTDGSVGFGAGKEVIIRTSGSGDTIGASGNRLVVNRSNFKLTLWVAEASPAGSKWNYKLESIYGDSATSYSATITGIAVGADRNVVLFSKPQFNAVKHMIFVTQRGVGALQESCETLLMVNNTSTADTKVYSTEYARLRTKTPDKAEENLLFEASYSITGNSVLLTIKNISQSTIDVYIKSIDAIGA
Physico‐chemical
properties
protein length:308 AA
molecular weight: 33013,43670 Da
isoelectric point:6,08788
aromaticity:0,08117
hydropathy:-0,27727

Domains

Domains [InterPro]
IPR036240
STR
1–306
IPR036240
IPR008987
ATT
7–183
IPR008987 IPR027412
G3DSA:1.20.5.960
Unmapped
18–49
G3DSA:1.20.5.960 IPR027411
GENB_4a9fc8268e8e
1 308
Architecture
ATT
STR
ATT 1-183 | STR 184-306 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_4a9fc8268e8e
1 308
Domain Start End Length (AA) Confidence
N-terminal 1 154 154 0,5269
Central domain 155 297 144 0,0018
C-terminal 298 308 10 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-154
Central
155-297
C-terminal
298-308

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Aszh-1
[NCBI] 		2698917 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
MN871442.1_CDS_[complement(157586..158512)] [NCBI]
Genbank nucleotide accession
MN871442.1 [NCBI]
CDS location
range 157586 -> 158512
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
117a1ed3477f3e8f55a3709b847e0f4a46bf7756624ad9ab09663ee9d15c101f

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,7224
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50