Protein

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Genbank accession
ARB10877.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSAGTLTLTNNTDAVTGSGTAFTAELAAGDFIVVTVGGIPYTLPVKAVNNNTSLTLVSVYTGPTQSGAAWSAVPRVALNMVTAALVAQSAEALRGLNYDKQNWQSIFSGTGNITVKLPDGSAWNGPAWNGITTELNKKANASDLGSAASKNTGLNSGDIMTVGSFGIGAKDGAYAFEVNDFGAVQVAMSGSGLRTYRNNGFLGDGDQSIAQYSPTIWVGTGDTWASLSLPYSPAGKIAVASGNESAGRMVVRLLWDNSNTVVDGNGFIKQASPVVRIFSDGGYETNDESEGVVVTRIQTGEYLIEGCTGLNADAAWGGIDGGFEIPVDRNKLARIWIDYEVNADGSVLVRTYHRVHPSAPPFAQNRIGNTDISGMFTETVADGEPVDIPADSFVSVRVEMPENSIWNKKQEATRIAMEEARMKEWRTDGNNV
Physico‐chemical
properties
protein length:432 AA
molecular weight: 45574,07690 Da
isoelectric point:4,63723
aromaticity:0,08102
hydropathy:-0,15509

Domains

Domains [InterPro]
DC_0709
STR
1–429
DC_0709
IPR058008
RBD
259–402
IPR058008
ARB10877.1
1 432
Architecture
STR
STR 1-429 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 29485
[NCBI] 		1970747 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Rissen
[NCBI] 		399587 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB10877.1 [NCBI]
Genbank nucleotide accession
KY709687.1 [NCBI]
CDS location
range 22793 -> 24091
strand -
CDS
ATGTCAGCAGGAACCTTAACTCTTACCAATAACACAGATGCTGTTACTGGCAGCGGCACAGCGTTTACAGCAGAACTTGCTGCTGGCGATTTTATTGTCGTAACTGTCGGCGGCATCCCTTATACACTTCCGGTTAAAGCAGTAAATAACAATACATCACTGACGCTGGTTAGTGTTTACACAGGCCCGACACAATCCGGCGCTGCGTGGTCTGCCGTGCCTCGTGTTGCTTTGAACATGGTCACGGCTGCCTTGGTGGCTCAAAGCGCTGAGGCATTGCGAGGACTGAATTACGATAAGCAGAACTGGCAAAGCATTTTTAGTGGAACCGGCAACATAACAGTCAAGTTACCTGATGGTTCTGCGTGGAACGGCCCTGCGTGGAATGGCATTACGACAGAACTAAATAAAAAGGCCAACGCCAGTGATCTCGGTTCTGCTGCTTCGAAAAACACTGGGTTAAATTCCGGTGACATAATGACGGTTGGGTCTTTTGGTATTGGTGCCAAAGATGGTGCCTATGCATTTGAAGTCAATGACTTTGGTGCAGTTCAGGTCGCAATGTCAGGTAGCGGACTCAGGACATATCGAAATAATGGTTTTCTTGGCGACGGTGATCAAAGTATTGCGCAATACAGCCCGACCATATGGGTTGGGACCGGGGATACCTGGGCATCATTATCGTTGCCGTATAGCCCTGCGGGGAAAATTGCGGTGGCATCAGGTAATGAGTCTGCTGGCCGTATGGTAGTGAGGTTGCTATGGGATAATAGCAACACTGTCGTTGATGGTAATGGATTTATTAAACAGGCATCGCCGGTTGTCAGAATTTTCTCTGATGGAGGTTATGAAACGAATGATGAATCAGAAGGTGTGGTCGTAACCAGGATACAGACTGGCGAGTACCTTATCGAGGGGTGCACTGGCCTTAATGCAGATGCAGCATGGGGAGGGATTGACGGTGGATTTGAGATCCCCGTAGACCGAAATAAACTTGCTCGCATCTGGATCGATTATGAGGTCAATGCTGACGGTTCGGTACTGGTCAGAACGTATCACCGGGTTCATCCCTCAGCACCTCCGTTTGCTCAGAACAGAATAGGTAATACTGATATTAGCGGCATGTTTACTGAAACTGTTGCTGATGGTGAACCAGTCGACATTCCTGCAGATTCTTTTGTGTCTGTACGTGTGGAAATGCCGGAAAACAGCATCTGGAATAAGAAACAAGAGGCTACTCGTATCGCTATGGAGGAAGCCAGGATGAAAGAATGGCGGACAGATGGTAATAATGTGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
d1bb17ca3c37891365065c2ce618a36e6c9772556345a8ca1fbe0331e92509c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8023
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequences of Podoviridae Bacteriophages Infecting Salmonella rissen Contaldi,F., Ianniello,F. and Capparelli,R. 2018-12 — GenBank