Protein

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Genbank accession
YP_009280190.1 [GenBank]
Protein name
tail length tape-measure protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
Protein sequence
MKKILDSARNYLKNNSRIKTASLISLELPGSTGTSTAFIYLTDYFRDVLYNGILYQAGKVKSISSHKQNRDLSIGSLSFTITGTAQDEVLKLVQNGVSFLDRTVSIHQAIITEDGSILPVDPDTNGPLLYFRGRITGGGIKDNISTSGVGTSTITWNCSNQFYDFDRVNGRYTDDASHRGLEVVAGQLVPSNGAKRPEYQEDYGFFHANKSISILAKYQVQEERYKLKSKKKLFGLSRSYSLKKYYETVTKEVDIDFNLAAKYIPVVYGVQKIPGIPIFADTELHNPNIVYVVYAFAEGEIDGFLDFSFGDNPMICMNDNDSSSRTCFGVKKVAGDTMQRIASGTPSSSPSVHGQEYKYNDGNGDIRIWTYHGKSDQTASEVLVDIAKERGFYLQNMNGNGPEYWDARYKLLDTAYAVVRFTINENRTEIPEVSAEIQGKKVKVYHSDGRVTANSTSLNGIWQTLDYLTSDRYGANITIDQFPLQQLIQEAAILDIIDESYQVSWQPYWRYVGWTDPLAENRQIVQMNTILDTSESVFKNVQGLLESYGGAINNLSGQYRVTVEKYSNTPLEINFLDTYGDLELSDTTGRNKFNSVQASIVDPALSWKTNSITFYNSKYKEQDKNLDKKLQLSFANITNYYTARSFADRELKKSRYSRTLSFSLPYQFIGIEPNDAIAFTYDRYGWDKKYFLVDEVENSREGKINVTLQEYGEDVFINSEQVDNSGNDIPDISNNVLPPRDFKYTPTPGGLVGSIGKNGELSWLPSLTNNVVYYSIVHSGHAEPYIVQQLETNPNERMIQEIIGEPAGLAIFEIRAVDINGRRSSPVTLSIELNSAKNLSVVSNFRVTNTASGDVTEFVGPDVKLAWDRIPEEDIIESIFYTLEIHDSQNRMLRSVRIENQYTYDYLLTYNKADFALQNSGALGINRKLYFRIRAEGDDGEQSVEWASI
Physico‐chemical
properties
protein length:949 AA
molecular weight: 106979,08200 Da
isoelectric point:5,16487
aromaticity:0,11170
hydropathy:-0,44004

Domains

Domains [InterPro]
DC_0187
STR
228–948
DC_0187
IPR032876
ATT
595–696
IPR032876
YP_009280190.1
1 949
Architecture
STR
ATT
STR
STR 228-594 | ATT 595-696 | STR 697-948 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009280190.1
1 949
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9323
Central domain 313 526 215 0,4301
C-terminal 527 949 422 0,0039
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-526
C-terminal
527-949

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage SHSML-45
[NCBI] 		1863010 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus SHSML45
Host Shigella sonnei
[NCBI] 		624 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009280190.1 [NCBI]
Genbank nucleotide accession
NC_031022 [NCBI]
CDS location
range 2813 -> 5662
strand -
CDS
ATGAAAAAAATACTAGATAGTGCTAGAAACTACTTAAAAAATAATAGCAGAATAAAAACTGCTAGTCTAATTTCTCTAGAGTTACCTGGCTCTACTGGTACTAGTACTGCTTTTATTTATTTAACTGATTATTTTAGGGATGTACTATATAATGGCATCTTATACCAGGCGGGTAAAGTTAAGTCTATTAGCTCACACAAACAAAATAGAGATTTATCTATTGGTAGTCTATCTTTTACTATTACTGGTACAGCACAGGATGAAGTACTAAAACTAGTACAAAATGGTGTATCCTTCTTAGATAGAACCGTATCAATTCATCAAGCAATTATTACTGAGGATGGTTCTATTCTACCAGTAGACCCAGATACAAATGGTCCTTTACTATATTTTAGGGGGAGGATTACTGGAGGGGGCATTAAAGATAACATTAGTACCTCTGGAGTAGGAACCTCTACAATTACCTGGAATTGTTCTAACCAATTCTATGACTTTGATAGAGTTAATGGTAGATATACTGATGACGCTTCCCATAGGGGGCTTGAAGTTGTAGCGGGACAATTAGTTCCATCTAACGGGGCTAAAAGACCTGAGTACCAAGAAGACTATGGGTTCTTTCATGCTAATAAAAGTATATCTATACTAGCAAAGTACCAAGTACAGGAAGAAAGGTATAAGCTAAAATCAAAGAAAAAACTATTTGGCTTATCTAGAAGCTATAGCCTTAAAAAGTACTATGAAACTGTTACTAAGGAAGTAGATATAGATTTTAACCTTGCTGCTAAATATATACCAGTAGTTTATGGCGTGCAGAAAATACCAGGAATACCTATTTTTGCGGATACAGAACTACACAATCCTAATATAGTTTATGTAGTATATGCCTTTGCTGAAGGGGAGATAGACGGTTTTCTTGATTTTTCCTTTGGCGATAACCCTATGATTTGTATGAATGATAATGATAGTTCTTCCAGAACCTGCTTTGGTGTTAAAAAAGTGGCTGGGGACACCATGCAAAGAATAGCGTCAGGAACACCCTCTAGTAGCCCTTCCGTGCATGGGCAGGAATATAAGTATAATGATGGTAATGGGGACATAAGAATTTGGACGTATCATGGAAAATCTGACCAAACGGCTTCTGAAGTACTAGTAGATATAGCTAAAGAACGTGGGTTCTATCTTCAAAATATGAATGGTAATGGGCCTGAATACTGGGATGCTAGATATAAGCTACTTGATACTGCTTATGCCGTAGTGCGTTTTACTATTAATGAAAACAGAACTGAGATTCCAGAAGTTAGTGCTGAAATTCAAGGTAAAAAGGTAAAAGTCTACCATTCTGATGGTAGAGTAACTGCTAATAGTACTAGTTTAAATGGTATTTGGCAAACACTTGATTACTTAACCTCTGATAGATATGGCGCTAATATTACCATTGATCAGTTCCCCCTTCAGCAACTAATACAGGAAGCAGCTATTTTAGATATTATAGATGAATCCTATCAGGTATCTTGGCAGCCATATTGGAGATACGTTGGATGGACTGATCCACTAGCAGAAAATAGACAAATAGTACAAATGAATACTATTCTGGATACATCTGAATCAGTATTTAAAAATGTGCAAGGTTTGTTAGAGTCCTATGGTGGGGCTATTAACAATTTATCTGGCCAGTATAGGGTTACTGTAGAAAAATACTCTAATACTCCATTAGAGATTAATTTTCTAGATACTTACGGTGATTTGGAGCTATCTGATACTACTGGTAGAAATAAATTCAACTCAGTTCAAGCATCTATCGTAGATCCAGCTCTTAGCTGGAAAACTAATTCCATTACATTCTATAACTCCAAGTATAAGGAACAGGACAAGAACCTAGATAAAAAATTACAACTATCTTTTGCTAATATTACTAATTACTATACTGCAAGAAGTTTTGCTGATAGGGAACTTAAGAAATCCAGATACTCAAGAACACTTTCTTTCTCATTGCCATATCAATTCATTGGTATTGAGCCTAATGATGCTATTGCATTTACATACGACCGTTATGGGTGGGATAAGAAGTACTTCCTAGTAGACGAAGTGGAAAACTCTAGGGAAGGAAAGATAAATGTTACTCTACAGGAGTATGGAGAAGATGTATTCATCAACTCTGAGCAGGTTGATAATAGCGGTAATGATATTCCCGATATTAGTAATAATGTCCTTCCTCCTAGAGACTTTAAGTATACCCCTACTCCTGGCGGTTTAGTAGGCTCTATAGGTAAAAATGGTGAGTTATCCTGGCTTCCGAGTCTAACCAATAATGTAGTTTATTACTCTATTGTGCACTCAGGCCATGCCGAACCTTACATAGTACAACAGTTAGAGACCAATCCTAACGAACGTATGATCCAAGAAATAATTGGGGAACCAGCAGGTCTGGCTATATTTGAGATAAGGGCAGTGGATATTAATGGTAGAAGAAGTTCTCCGGTGACTCTGTCCATAGAACTTAACTCCGCTAAAAACCTTAGTGTAGTATCTAATTTTAGGGTAACTAATACTGCTTCTGGAGATGTAACTGAGTTTGTTGGCCCAGATGTGAAACTAGCCTGGGATAGAATACCTGAAGAAGATATAATAGAGAGTATATTTTATACCCTTGAAATACACGATTCACAAAATAGGATGTTAAGAAGTGTACGTATTGAAAATCAGTATACTTATGACTATTTATTAACGTATAATAAGGCAGACTTTGCTCTCCAGAATAGTGGTGCTCTAGGTATAAATAGAAAATTGTATTTTCGTATTAGGGCCGAAGGGGATGATGGAGAACAGTCTGTGGAGTGGGCATCCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9f39dd440bbe83d88f5df423a67a271eb7a8ed79e7e5ae3def2f94b2690c530f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8137
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genetic Characterization of ShigActive phages Das,C.R., Woolston,J., Li,M., Sulakvelidze,A. and Soffer,N. 2013-11-08 — GenBank