Protein

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Genbank accession
YP_006989828.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAAAIALPIVSAIVSTAISYAFPSDGPRLRDTKVSASTYGNVIPEIYGTARVGGNMIWSKPFTEKKKKKRAGKGGSYYNEYTYYCDFAMAFCRGPVKEVRRIWADGKVIYDTTGGSEVIDNNKYRFRFYPGDEAQLPDSLIVEDKGADYAPAYRGLCYVVFDDFALADFGNRIPQIMAEVYAGDEGGAAITDIVPLPSSPVTGGSYQLGQMMIDADRGYFYLVDSVSNPAGTVLRRFLLANGKEDRREIVSIPQAQFPPSVYDSPDLTSVRAVTSKGELLCVFGGINNYMRIEKLDPYSWQSLGTIGRSYPFEGTPENSLEHSNTNFEISRDEKGNYLCLTLGVFGEYNIFDPSDMSFKGKGEMAGWGGPATPMYICARQGGSAASRRFYHVTYTGGASLQVCSLGEVLYNHPLDHPGDSQTATSWAFWDEGDPGVVFFYSDGPNRYIAKWSESTGVLAWKTQLRNGDPFCGYGVYGLRARIKDNEFHWVYNKHLFSINTATGQWIDRTFDQDFYKSDNDKTAEQVNDGDKGLLLPRDISEDYVIYDPRRNIVICIGAIQAQNGIVHVGGYTGGKTSVGAIVERLLVSTGQMTSNDYDLTPLYDIPVYGYGYASSTDIKSIIAELRNLFMFDLVESDGRLVARVRGDQDPDAEVPWKLLGSQGGPTPDKADYWKETRMSESDLPASIDLTYSNIDDDYNPSTAKSKRIASPVATMLSRQQVKAECNLVMDATEAKNRVNIMLYTQWEERTQHQTALPWLYANLDASDLISVTMEDGRNYFERIGSIEFGADFSSRLETYGTDSGAYLSDKTGDGGGAGRPTVVPAPKPVVGFILNTPLLRDTHDSGGNFSNWYSAIGAGAPGVFLGGTMFKSANSQDYIDLYQEPESAEWGTVMGVVPSPSHGWFALDWETRITITPAVDFFELESITDDELWEGLNLVMIGDEVLQFRDAVQNADGTWTIWNLLRGRRGTQYACDNHKAGERFLFLDERSIEFQAENLDTSGQNRWYKAVGSGMSLFETDPIQINYQPRDLMPYRPADIRRAVAGGDVTVTWKRRTRFTATLKDGTGEVSLNEGTEAYEAYVLATSYAGDLSRQDAPAVYRRKYTLTSPSFTYTAAEQAADGFDVNLDTLHVVIYQLSSVVGRGFPGARSIESWQDF
Physico‐chemical
properties
protein length:1158 AA
molecular weight: 128317,58010 Da
isoelectric point:4,80980
aromaticity:0,11831
hydropathy:-0,36934

Domains

Domains [InterPro]
DC_1879
ATT
1–248
DC_1879 IPR007110 DC_1657 IPR056490
IPR032876
ATT
615–787
IPR032876
DC_1311
RBD
784–1157
DC_1311
YP_006989828.1
1 1158
Architecture
ATT
STR
STR
ATT
STR
RBD
ATT 1-248 | STR 259-339 | STR 559-614 | ATT 615-787 | STR 788-813 | RBD 814-1157 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006989828.1
1 1158
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,8551
Central domain 199 578 381 0,8016
C-terminal 579 1158 579 0,1076
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-578
C-terminal
579-1158

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage CcrSwift
[NCBI] 		2927984 Uroviricota > Caudoviricetes > Jeanschmidtviridae > Shapirovirus swift >
Host Caulobacter crescentus
[NCBI] 		155892 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006989828.1 [NCBI]
Genbank nucleotide accession
NC_019411 [NCBI]
CDS location
range 67721 -> 71197
strand +
CDS
ATGGCCGCCGCCATTGCCCTTCCGATCGTCTCCGCCATTGTCAGCACGGCGATCAGCTACGCCTTCCCGAGCGACGGCCCGCGCCTGCGCGACACTAAGGTCTCGGCCTCGACCTATGGCAACGTGATCCCGGAAATCTACGGGACCGCGCGTGTCGGCGGCAACATGATCTGGTCCAAGCCGTTCACCGAGAAGAAGAAAAAGAAGCGGGCCGGCAAGGGCGGCTCCTACTACAACGAGTACACCTACTACTGCGACTTCGCCATGGCCTTCTGCCGGGGACCGGTCAAGGAAGTGCGCCGCATCTGGGCCGACGGCAAGGTGATCTACGACACCACCGGCGGCTCGGAGGTGATCGACAACAACAAGTACCGCTTCCGCTTCTATCCCGGCGACGAGGCGCAGCTTCCCGACAGCCTCATCGTCGAGGACAAGGGCGCCGACTACGCGCCCGCCTATCGCGGGCTCTGCTATGTCGTGTTCGACGACTTCGCCCTGGCCGATTTCGGCAACCGCATCCCGCAGATCATGGCCGAAGTCTACGCCGGCGACGAAGGCGGCGCGGCGATCACCGACATCGTCCCGCTGCCTAGTTCTCCGGTCACCGGCGGCTCCTACCAGCTTGGCCAGATGATGATCGACGCCGACCGGGGCTACTTCTACCTCGTCGATTCGGTGTCCAACCCGGCGGGCACCGTCCTGCGTCGCTTCCTGCTGGCGAACGGTAAGGAAGACCGTCGTGAGATCGTCTCGATCCCGCAGGCCCAGTTCCCGCCCTCGGTCTATGACAGCCCCGACCTGACCTCGGTCCGGGCGGTCACCTCCAAGGGCGAGCTTCTCTGCGTCTTCGGCGGCATCAACAACTACATGCGGATCGAGAAGCTCGATCCCTATTCCTGGCAGTCCCTGGGGACGATCGGCCGCAGCTATCCCTTCGAGGGTACTCCCGAAAACAGCCTGGAGCACTCCAACACCAACTTCGAGATTTCGCGGGACGAGAAGGGCAACTACCTCTGCCTGACGCTGGGGGTGTTTGGCGAATACAACATCTTCGACCCCTCCGACATGTCGTTCAAGGGCAAGGGGGAAATGGCCGGATGGGGCGGTCCGGCGACGCCGATGTACATCTGCGCCCGCCAAGGCGGCTCGGCGGCCTCCCGCCGCTTCTATCACGTCACCTATACGGGCGGGGCGTCCTTGCAGGTGTGCAGCCTGGGCGAGGTGCTCTACAATCACCCGCTCGACCATCCTGGCGATTCCCAGACCGCGACGTCCTGGGCTTTCTGGGACGAGGGCGATCCGGGCGTGGTCTTCTTCTATTCCGACGGCCCCAACCGCTACATCGCCAAGTGGTCCGAATCCACTGGCGTGCTGGCCTGGAAGACCCAGCTTCGCAACGGCGATCCGTTCTGCGGCTACGGAGTCTACGGCCTGCGCGCCCGGATCAAGGATAACGAGTTCCACTGGGTCTATAACAAGCACCTGTTCTCGATCAACACCGCCACGGGGCAGTGGATCGACCGGACCTTCGACCAGGACTTCTACAAGAGCGACAACGACAAGACCGCCGAACAGGTCAACGACGGCGACAAGGGCCTGCTGCTGCCGCGCGACATCTCCGAGGACTATGTCATCTACGATCCGCGCCGCAACATCGTGATTTGCATCGGGGCGATTCAAGCCCAGAACGGCATCGTCCACGTCGGCGGCTATACGGGCGGCAAGACTTCGGTGGGGGCCATCGTCGAGCGTCTGCTGGTCTCCACGGGGCAGATGACCTCGAACGACTATGATCTGACGCCGCTCTATGACATCCCGGTCTACGGGTATGGCTACGCCTCTTCGACCGATATCAAGTCGATCATCGCCGAACTGCGCAACCTCTTCATGTTCGATCTCGTCGAAAGCGACGGCCGGCTGGTCGCGCGCGTGCGCGGCGATCAGGACCCCGATGCCGAGGTGCCCTGGAAGCTCCTGGGCTCCCAGGGCGGCCCGACCCCGGACAAGGCCGACTACTGGAAAGAGACCCGGATGTCGGAGTCCGATCTTCCGGCCTCGATCGACCTGACCTATTCGAACATCGACGACGACTATAACCCGTCGACGGCCAAGTCCAAGCGGATCGCCTCGCCGGTGGCGACCATGCTGTCGCGCCAGCAGGTCAAGGCCGAGTGCAACCTCGTCATGGACGCGACCGAGGCCAAGAACCGCGTCAACATCATGCTCTACACCCAGTGGGAGGAGCGCACGCAGCACCAGACGGCCCTTCCCTGGCTCTACGCCAATCTCGACGCCTCGGACCTGATCTCGGTGACCATGGAGGACGGTCGCAACTACTTCGAGCGGATCGGCTCGATCGAGTTCGGCGCCGACTTCTCCTCGCGCCTGGAAACCTACGGTACCGACAGCGGCGCCTACCTTTCGGACAAGACCGGCGACGGCGGCGGCGCCGGACGGCCCACGGTCGTGCCGGCCCCCAAGCCGGTGGTGGGCTTCATCCTCAACACCCCGCTGCTGCGCGACACCCACGACAGCGGCGGCAACTTCTCCAACTGGTATAGCGCCATCGGCGCCGGCGCGCCGGGCGTGTTCCTCGGCGGCACGATGTTCAAGTCCGCCAATTCGCAGGACTACATCGATCTCTACCAGGAGCCGGAGAGCGCAGAGTGGGGCACGGTGATGGGTGTCGTGCCCTCGCCCTCGCATGGCTGGTTCGCGCTCGACTGGGAGACGCGCATCACCATCACGCCGGCGGTCGACTTCTTCGAACTGGAATCGATCACCGACGACGAGCTTTGGGAAGGCCTCAACCTCGTGATGATCGGCGACGAGGTCCTCCAGTTCCGCGACGCGGTGCAGAACGCCGACGGCACCTGGACGATCTGGAACCTGCTGCGCGGCCGGCGCGGGACGCAATATGCCTGCGACAATCACAAGGCCGGCGAGCGCTTCCTGTTCCTCGACGAGCGCTCGATCGAGTTCCAGGCCGAGAACCTCGACACCTCGGGCCAGAACCGCTGGTATAAGGCGGTCGGCTCGGGCATGTCGCTGTTCGAGACCGATCCGATCCAGATCAACTACCAGCCCCGCGACCTCATGCCCTACCGCCCGGCCGACATCCGTCGGGCGGTCGCGGGCGGCGATGTCACCGTGACCTGGAAGCGTCGCACGCGTTTCACGGCCACGCTAAAGGACGGCACCGGCGAAGTCAGCCTCAACGAGGGGACCGAAGCCTATGAGGCCTATGTCCTCGCCACGTCTTACGCGGGGGACCTGTCGCGTCAGGACGCGCCGGCCGTCTACCGCCGCAAATACACCCTGACGAGTCCGAGCTTCACCTACACGGCGGCCGAGCAGGCGGCCGACGGATTTGACGTGAATCTTGACACTCTGCACGTGGTGATCTATCAGTTGAGTTCGGTTGTTGGTCGGGGTTTCCCCGGCGCGCGCTCGATTGAGTCCTGGCAGGACTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
697dcba4427aa35b30de5d4943defdcf8f18c18c3a1de80be6a9f10830e577f9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7273
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50