Protein

Genbank accession
CCI88572.1 [GenBank]
Protein name
receptor-binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSIFVGRLGGKSVLSLNAGASTDTNVHINPNADTIFHSDMPFVLVDSTHESALTSIGNGFYVCQMPADIASLKSNDSGRVILTAIEINGTHTGFLNGTQSFVGQTLMYGNDEQRAYSSLSMSSGFASGSSLAHGTYQYISGRGHEESIARNGTGGTILQVAGANIFRPGGVSPGETISICYTLLGFGNGTIVPINASNPNYWNPNWQSPIGAANMGHDWFYVCSSNIRGVTANYGTSRPGNTDLLFSQNATYTVKGSSTNLGNQGTAVRRVQDSYPCTPTKVIWYVLNLKYSDGTMNVAGNPFTGTDIILSPKDFTIKGVKLRETTYKFINQNSFGSLTGRPDMEYIGSNSSYPGVFGDTTGRAAFNASNNGSIITPVSYGGRASQLSIYKFNASKEWYMNTKTTSIGNENGEVWSPRTIPLRLLANNVASSYIGDDINPLLIASGDRYTAQSSVYLGIPNRDTTVILTIEVIMGNINSSGLMVGTFGGTTWPTQGRKAISYTGGDGIFHQILTLPPGELVPFHSTTSYWNTMEYSNSSNMVFMRGGLNYTIKNLGNGYVELGVVTHFPRNTAAFIPRFRVTIQRLT
Physico‐chemical
properties
protein length:587 AA
molecular weight: 63136,89750 Da
isoelectric point:8,46394
aromaticity:0,10221
hydropathy:-0,17819

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage phiR2-01
[NCBI] 		1206557 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Yersinia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CCI88572.1 [NCBI]
Genbank nucleotide accession
HE956708 [NCBI]
CDS location
range 109210 -> 110973
strand -
CDS
GTGAGTATTTTTGTAGGTAGATTAGGGGGAAAATCGGTATTATCCCTAAACGCTGGGGCATCTACGGATACTAATGTCCATATTAACCCTAATGCCGATACTATCTTCCACTCCGACATGCCATTCGTTCTAGTGGATAGTACTCATGAGAGTGCTTTAACTAGTATAGGTAATGGATTTTACGTTTGTCAAATGCCAGCAGATATAGCCTCGCTAAAGTCTAACGATAGCGGAAGGGTTATACTCACTGCTATTGAAATAAATGGTACTCATACGGGGTTTCTAAATGGAACTCAAAGTTTTGTAGGACAAACGCTAATGTACGGTAATGACGAACAACGAGCTTATAGTTCCTTAAGTATGTCCTCTGGATTCGCATCTGGATCTAGCTTAGCTCATGGAACCTACCAATATATTAGTGGTAGGGGTCATGAAGAATCTATTGCTAGGAACGGAACAGGTGGTACTATATTACAGGTTGCAGGTGCTAATATATTTAGGCCTGGTGGTGTTTCCCCCGGTGAAACTATCAGTATATGCTATACTCTATTAGGGTTTGGTAATGGTACTATAGTTCCTATAAACGCTAGTAACCCTAACTACTGGAATCCAAACTGGCAAAGCCCGATAGGTGCAGCTAATATGGGGCATGACTGGTTCTACGTATGTTCATCTAATATTAGGGGGGTTACTGCCAACTATGGTACCTCTCGCCCTGGTAATACTGATTTGTTGTTTTCACAAAATGCCACTTATACCGTAAAGGGCTCCAGTACAAACTTAGGTAATCAGGGGACTGCTGTACGTAGGGTACAGGATTCATATCCCTGTACTCCCACTAAAGTTATCTGGTATGTGCTCAACTTAAAATATTCTGATGGTACTATGAATGTTGCAGGCAATCCATTTACTGGTACTGATATTATTCTAAGTCCTAAAGATTTTACAATAAAGGGTGTGAAACTTCGTGAAACTACATATAAGTTTATAAACCAGAATAGCTTTGGTAGTCTCACAGGTAGGCCGGATATGGAGTATATAGGTAGTAACTCCTCATACCCTGGTGTTTTTGGTGATACTACTGGTAGGGCTGCTTTCAACGCATCTAACAATGGTAGTATCATCACACCTGTTAGCTACGGTGGTAGGGCATCTCAATTAAGTATCTATAAGTTCAACGCCAGTAAAGAGTGGTATATGAACACAAAAACCACCTCAATAGGCAATGAGAATGGGGAGGTTTGGAGTCCTAGAACAATTCCCCTAAGATTACTAGCCAATAACGTGGCTAGTTCATATATTGGTGACGATATTAACCCATTACTTATAGCTTCTGGTGACAGATATACTGCCCAGTCTAGTGTGTATCTAGGTATACCTAATAGGGATACTACAGTTATTTTAACTATAGAAGTTATTATGGGTAATATCAATAGCTCCGGGCTAATGGTAGGCACATTTGGTGGCACTACCTGGCCTACACAAGGTAGAAAAGCTATTTCATACACTGGTGGCGACGGTATATTCCATCAAATTCTAACTTTACCACCAGGAGAACTGGTCCCCTTCCATTCTACTACATCTTATTGGAATACTATGGAGTATTCCAATAGTTCTAATATGGTCTTTATGCGGGGCGGGTTAAACTACACAATAAAGAATCTAGGTAACGGTTATGTGGAGCTAGGCGTAGTTACTCACTTCCCTAGAAATACTGCTGCCTTTATCCCTAGATTTAGGGTAACTATTCAGAGGTTAACATAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
2cf14eb3d46fcfcf454f94b9005c4eed0c285123996b4fa4cb22c4049d2c71bc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2512
Evidence 0,2512
Download PDB

Literature

Title Authors Date PMID Source
Genomic, physiological and proteomic characterization of the T5-like bacteriophage phiR2-01 infecting Yersinia enterocolitia Pajunen,M.I., Happonen,L.J., Jun,J.W., Malmstrom,J., Nawaz,A., Mattinen,L. and Skurnik,M. 2021-10-28 — GenBank