Protein

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Genbank accession
GENB_803e1312bf90 [GenBank]
Protein name
receptor binding protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,71
Protein sequence
MGYPPVGRGRGGTGPAPAGRGRVGPKGNDGLTPHVGSNGNWFLGNKDTGVSATGTSVDASSLKEGSVPRWSVKDQKLVDSGVVSDNDGELKISPSSIFFGNHAMEASLENVVFRNTQTHRVYAPLWQEVAPGQDVGYVRSYSSTIDKVVRVPDGNVDVTNPVNENVQVGVNEVFLGGKFTLSQDATNLILEIYDHADKSLIWRQRLGDQTAGEKNVTFEVPFDVRAGYSYDIKLLSADGSNVVAKSNSSTGFSWTINRALWRDIPVATQDWTKTQLANVPGGQPVDASSPIVKVSLSGDQLTFTHADTAKQVIQLPTSGSSGSPTDLKQLRDQMTLLERDLTNKGNDINSLKNQYGQLDHKIEDLSGTYSYDGDMLPDYPDDPKHSYFVHLHGTAARDIMVDLPNPTGGRTLDGTMFVLGNANAQAQVRLSPNSAETIEGAKEVTVKPNHYIMLVKSGTNWVKVIDSSLLSSQVPLNVTPEMIFDAMDRGTFTGAGSLKTLDPGWWVIPEANTQASGRPPGSQGDLVFYNARVGKQDGSNPKYGINMAFGKDREGNDQAWAEYRNKDGWTPWIPLYQKDGTPVDLTQINQDIADIKAKTAANTQSISTLRTDFGNIFAPDKAAFDTEANKVVNAAITPLKDDLNQLPEAIEKSLLNKGWGPLPKDTGGSGHQPSLVLPEFWALFSAAFPTTLTGSISSTTGEVHMKKIGSGQERLWIVLKTADAGKVKSIKIGNAFESVWDSRSITIDGEQYTGFYSAGGFTTLDETIVVKFGG
Physico‐chemical
properties
protein length:774 AA
molecular weight: 83522,10020 Da
isoelectric point:5,33300
aromaticity:0,08010
hydropathy:-0,41693

Domains

Domains [InterPro]
G3DSA:2.60.120.220
ATT
18–72
G3DSA:2.60.120.220 DC_0845
Coil
Unmapped
327–368
Coil
GENB_803e1312bf90
1 774
Architecture
ATT
STR
ATT 18-72 | STR 73-774
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
GENB_803e1312bf90
1 774
Domain Start End Length (AA) Confidence
N-terminal 1 699 699 0,9358
Central domain 700 763 65 0,6013
C-terminal 764 774 10 0,3484
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-699
Central
700-763
C-terminal
764-774

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phivp505_B
[NCBI] 		3141528 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
PP701474.1_CDS_[complement(60626..62950)] [NCBI]
Genbank nucleotide accession
PP701474.1 [NCBI]
CDS location
range 60626 -> 62950
strand -
CDS

  




        

        
      
    
  






  

  
  

    
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Tertiary structure


  



  

    

      
        
          
            
              

                

                  

                    

                      
PDB ID

                      
4462afe687bb908eebc41160dbe267dc3a3e8b8e35f156c112ed2c639c01a18b

                    

                    
                      ESMFold
                    
                  

                  

                  

                    

                      Source
                      ESMFold
                    

                    

                      Method
                      ESMFold
                    

                    

                      Resolution
                      0,6088
                    

                    

                      Oligomeric State
                      monomer
                    

                    
                  

                  

                    
                      Download PDB
                    
                  

                  
                  
                  
                

                
                
                

                  

                    
                      
Model Confidence

                      

                        

                          

                          Very high
pLDDT > 90
                        

                        

                          

                          High
90 > pLDDT > 70
                        

                        

                          

                          Low
70 > pLDDT > 50
                        

                        

                          

                          Very low
pLDDT < 50