Protein

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UniProt accession
A0A8S5RRN1 [UniProt]
Protein name
Nucleoid-associated protein
RBP type
TSP
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,87
Protein sequence
MADENKNVNVPDVSVEDVKTIVINVGVPGRRGGEGEPGVPGPKGEPGEPGPKGEPGEPGKPGKDGQDASAEKAYQKLLHGNVWVEDSTVDDVLIALIDNIGKPFPRTTFKPLTVGNAARGQRVIGIEGEPHYTVKVVGNDIDVFGLDEAGVGNITIEPLGEDDVKLTYHNYTSDKVGDYTIKGKAAEIERPADDTYEENGVKYSLYGRKIVANVTGYTGSNTSNNWPAEPQFNFFGKWDKSNIDTIELYANKKKTLYINKNGTIRQDTFKDKTIYIRNPKNVSFGVVDRFDNETNTAFVIGTVEHGAKQLRIINYSDIVWDENNNKYINTGGTIDHL
Physico‐chemical
properties
protein length:337 AA
molecular weight: 36901,49120 Da
isoelectric point:5,03476
aromaticity:0,08309
hydropathy:-0,65015

Domains

Domains [InterPro]
DC_1051
STR
2–326
DC_1051
PTHR24637
Unmapped
26–108
PTHR24637
IPR008160
STR
26–67
IPR008160
G3DSA:1.20.5.320
STR
38–89
G3DSA:1.20.5.320
A0A8S5RRN1
1 337
Architecture
STR
STR 2-326 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5RRN1
1 337
Domain Start End Length (AA) Confidence
N-terminal 1 193 193 0,8444
Central domain 194 326 134 0,9598
C-terminal 327 337 10 0,3718
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-193
Central
194-326
C-terminal
327-337

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctwNf2
[NCBI] 		2827597 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE91929.1 [NCBI]
Genbank nucleotide accession
BK057791 [NCBI]
CDS location
range 11528 -> 12541
strand -
CDS
ATGGCAGATGAAAACAAAAATGTAAATGTACCGGACGTTTCAGTTGAGGACGTTAAGACGATTGTAATTAATGTTGGTGTACCTGGTAGACGTGGCGGTGAGGGTGAGCCTGGAGTTCCAGGCCCTAAAGGTGAACCAGGTGAGCCAGGCCCTAAAGGTGAGCCAGGCGAGCCGGGTAAACCAGGCAAGGACGGCCAAGACGCAAGTGCAGAAAAGGCATATCAAAAGTTGCTGCACGGTAACGTATGGGTTGAGGATTCTACCGTTGATGATGTACTCATCGCATTGATTGATAATATCGGTAAGCCGTTCCCTAGAACTACATTCAAACCTTTGACTGTTGGCAATGCTGCACGAGGTCAGCGAGTGATTGGTATTGAGGGCGAGCCTCATTACACCGTCAAAGTCGTAGGTAATGATATCGACGTGTTCGGATTGGACGAGGCAGGCGTTGGTAATATCACAATCGAGCCTTTAGGTGAAGATGATGTGAAATTGACATATCATAATTACACAAGTGATAAGGTAGGTGATTATACAATCAAAGGCAAGGCAGCAGAAATCGAAAGACCAGCAGACGATACTTATGAAGAAAACGGCGTCAAATACTCTTTGTATGGCCGTAAAATCGTCGCCAATGTAACAGGATATACAGGCAGTAATACGTCTAATAACTGGCCGGCTGAGCCTCAATTCAACTTCTTTGGTAAGTGGGATAAATCTAATATTGATACAATCGAACTTTATGCTAATAAGAAAAAGACTTTATATATCAATAAAAACGGTACTATTCGACAAGATACATTTAAAGATAAAACAATTTACATTAGAAACCCTAAGAATGTCAGTTTTGGAGTTGTTGACCGCTTTGACAATGAGACAAATACTGCATTTGTAATCGGTACCGTTGAGCATGGTGCTAAACAATTACGTATTATAAATTATAGTGATATAGTTTGGGACGAAAACAATAACAAATATATCAATACCGGCGGTACTATAGACCATTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
01295017f265ba741290cd4b6c8a764629ea0f9a71cf26f5a6b1ff17fc517717
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7818
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50