Protein

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Genbank accession
XYL02397.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MATAVFKPYRDYSTMAARFHYRTVQDTAVPGRDYDHVEGDVTIPVGATSIEIPVEIVDKLPNRLPRSFFMEFSSNSQGVMIGTQRAKCTIVSDENLDRISWDTVEERMFHPRYWVTTTQQTESTCIVADNNCCINRLVSRTYGGMAGCIWETVDKYDHFGIGFDDHYEMRNTKLWFRMSITNASNFSTPEKMIMTVDLVDGTIIYVPLAQYAVSISEDKKCFINSY
Physico‐chemical
properties
protein length:226 AA
molecular weight: 25891,04500 Da
isoelectric point:5,23126
aromaticity:0,11504
hydropathy:-0,27699

Domains

Domains [InterPro]
IPR038081
ATT
8–94
IPR038081 IPR057102
IPR038081
ATT
8–95
IPR038081
IPR038081
ATT
14–110
IPR038081
IPR003644
ATT
17–92
IPR003644
XYL02397.1
1 226
Architecture
ATT
TAS
ATT 8-110 | TAS 111-220 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL02397.1
1 226
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,1987
Central domain 121 215 96 0,4400
C-terminal 216 226 10 0,7846
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-215
C-terminal
216-226

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage FV3
[NCBI] 		3433636 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL02397.1 [NCBI]
Genbank nucleotide accession
PV685965 [NCBI]
CDS location
range 25728 -> 26408
strand -
CDS
ATGGCAACAGCTGTTTTTAAACCTTACCGTGATTACTCTACAATGGCTGCACGGTTTCATTACCGCACAGTTCAAGATACTGCCGTTCCAGGTAGGGATTATGATCATGTTGAGGGCGATGTAACTATCCCGGTTGGGGCAACCAGTATTGAGATTCCTGTAGAAATTGTTGACAAATTGCCAAACAGGTTGCCAAGAAGCTTCTTTATGGAGTTTTCATCAAACTCCCAAGGGGTTATGATTGGAACACAAAGAGCGAAATGTACAATAGTTTCAGATGAGAATCTTGACAGAATATCTTGGGATACCGTTGAGGAGAGAATGTTTCACCCAAGATATTGGGTTACAACCACACAGCAGACTGAAAGCACCTGTATTGTTGCGGATAATAACTGCTGTATTAACCGTTTAGTGTCAAGAACATATGGAGGCATGGCTGGGTGCATTTGGGAAACAGTTGACAAATATGACCATTTCGGCATTGGATTTGATGATCACTACGAGATGAGAAACACCAAGCTTTGGTTCAGAATGTCAATAACCAATGCCAGCAACTTCTCCACCCCTGAAAAGATGATTATGACTGTAGACCTTGTTGACGGCACAATCATCTATGTTCCTTTAGCTCAATATGCTGTCAGCATCTCAGAGGATAAGAAATGTTTCATAAATTCATATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
696c6460a87f780f0feec80e508ca5b706542de1fb8f290b7899bf6a94c52bbb
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5917
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50