Protein

View in Explore
Genbank accession
XVB94886.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSSRCGDVLSLADLQTAKKHQIFEAEVITGKSGGVATGADIDYATNQVTGQTQKTLPAVLRDAGFSPVSWDFSTGGTLTVNDRDKVVYDPISTTWYSYAGTLPVTVPASFNPVGNANWRPQTDPNLRGELSIIENIAELMSKTPNPELTYTVKGYAPGTTFGGGIFYWDATLPKSQHNGITVFSPTVPWDGTYTTLATFLAGTGETTPSGRGCWVRMQNSRDMLVSWGGVDITGTNVADAAVTAVIKYANTVKRSVRFDSGANIKWGFSTLVQHFDKFNLNVQCSVVLENISGIKVYAENDVEFNTDHPTYAERVVFRLKNCSEVEFSGFNFNSNFADYSTTTSDTTYKPQEWWQGFTAEGCSNLEITKHHVNACQVFVRADCTNLAANLHNIDIHVTDNMFKYVTNYCVISRNINLVEFSRNKVSFNGRKWHTFGEAFAPTTGSLNIIARDNIFTGQIAQQSCITPTIGALSVTIQGNYCRRQYGIFVELGSSSNVLISGNTSISTGERADTTHILLVGAVDGNPAGGLSNVNITANYFQGGGFAIQEYNTGNALRTGFSITNNHMIDCKLPAITNQSYIGVVVRGNYMEAPTNFPDLAIAGQRPVIDGNMFVGVRVRARDLGYSVIAPKVTNNVWRANSLGESYPALIDYTEFTALVADGNDSTAAAYTDFIVHPSNCNNAGFRRVGPTEGFSVSPSARFGAKLTDAHVGDFVANSSPTASGTYAWVCVNQTTKTFSSIALSA
Physico‐chemical
properties
protein length:745 AA
molecular weight: 80650,05500 Da
isoelectric point:5,84324
aromaticity:0,10470
hydropathy:-0,15074

Domains

Domains [InterPro]
DC_0018
ATT
1–162
DC_0018 DC_0317
G3DSA:2.10.10.80
ATT
65–132
G3DSA:2.10.10.80 IPR011050
XVB94886.1
1 745
Architecture
ATT
STR
ATT 1-162 | STR 216-745
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XVB94886.1
1 745
Domain Start End Length (AA) Confidence
N-terminal 1 237 237 0,9919
Central domain 238 689 453 0,9915
C-terminal 690 745 55 0,9646
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-237
Central
238-689
C-terminal
690-745

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Eco_ORH_001
[NCBI] 		3425915 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XVB94886.1 [NCBI]
Genbank nucleotide accession
PV656001.1 [NCBI]
CDS location
range 5438 -> 7675
strand -
CDS
ATGTCAAGCAGATGTGGTGACGTTTTAAGCTTGGCGGATTTACAAACCGCCAAAAAACACCAGATTTTCGAGGCTGAGGTTATCACGGGTAAATCCGGCGGTGTTGCTACGGGTGCTGATATCGATTACGCGACAAATCAGGTTACTGGACAGACCCAGAAGACGTTACCTGCCGTGTTGCGTGATGCTGGTTTTTCTCCTGTATCGTGGGACTTTTCCACCGGCGGCACGCTAACTGTTAACGACCGTGATAAAGTGGTGTATGACCCTATAAGTACAACGTGGTATTCGTACGCTGGCACTTTGCCGGTTACAGTTCCCGCGAGTTTTAATCCCGTAGGTAACGCTAACTGGAGGCCACAGACCGATCCTAATTTACGTGGTGAGTTATCCATCATTGAAAACATAGCTGAGCTTATGTCTAAAACGCCAAACCCAGAACTCACGTACACCGTGAAAGGCTATGCCCCCGGTACGACTTTCGGCGGGGGCATTTTCTACTGGGACGCCACCCTCCCTAAGTCACAACACAACGGCATCACTGTATTTAGTCCAACGGTGCCATGGGACGGAACCTACACCACTCTCGCGACCTTCTTAGCTGGCACAGGGGAAACCACCCCATCCGGCAGAGGATGCTGGGTCCGTATGCAGAACAGCCGCGACATGCTCGTTTCTTGGGGCGGCGTTGACATCACAGGGACGAACGTTGCGGACGCCGCTGTAACCGCTGTTATTAAGTATGCTAATACGGTCAAGCGTTCTGTTAGATTTGACTCTGGTGCAAATATTAAATGGGGCTTCTCTACCCTTGTCCAGCACTTTGACAAGTTCAATCTTAATGTGCAATGTTCTGTTGTTCTGGAGAATATCAGCGGGATTAAGGTTTACGCGGAGAATGACGTTGAGTTCAACACTGACCACCCTACTTATGCGGAGCGTGTTGTCTTTCGCCTTAAAAACTGTAGCGAAGTGGAATTCTCTGGATTCAACTTCAACTCCAATTTCGCCGACTATTCGACGACGACATCGGACACTACGTACAAGCCCCAAGAATGGTGGCAGGGCTTCACAGCCGAAGGTTGTTCTAATCTAGAAATCACTAAGCATCACGTTAATGCGTGCCAAGTATTTGTAAGGGCTGATTGTACAAACTTAGCAGCAAACCTTCATAACATAGATATTCATGTTACAGATAACATGTTTAAGTATGTAACGAATTACTGCGTTATTTCCAGAAACATAAATCTGGTTGAATTCAGCCGCAACAAGGTTTCATTTAACGGGAGGAAATGGCATACCTTTGGTGAAGCGTTCGCTCCAACAACAGGCTCTCTCAATATAATTGCTAGAGATAATATTTTTACTGGCCAGATTGCGCAACAATCGTGTATAACTCCGACGATAGGCGCTTTATCTGTAACTATTCAGGGTAACTATTGCCGCCGGCAGTATGGTATTTTTGTTGAACTCGGTAGTTCAAGCAATGTGTTAATTTCTGGTAATACATCGATAAGTACCGGTGAGCGCGCTGATACAACACACATTCTTTTGGTTGGGGCGGTAGATGGCAATCCGGCAGGTGGGCTTTCAAACGTAAACATTACCGCAAACTATTTTCAAGGCGGTGGTTTTGCCATTCAAGAATACAATACCGGAAACGCATTGCGCACTGGGTTCAGTATAACTAATAATCATATGATTGACTGCAAATTACCAGCCATCACTAACCAATCTTACATTGGTGTTGTAGTTCGCGGTAACTATATGGAAGCACCCACTAACTTTCCTGATTTAGCTATCGCAGGACAGAGGCCTGTTATAGACGGTAACATGTTTGTTGGTGTTAGGGTGCGTGCAAGAGATTTAGGGTATAGCGTAATAGCTCCTAAGGTAACCAACAATGTATGGAGAGCAAACTCCCTGGGGGAATCATATCCAGCACTTATCGACTATACCGAATTCACCGCATTAGTGGCGGATGGCAACGACTCAACAGCAGCGGCGTACACGGACTTCATTGTCCACCCTTCAAATTGTAATAATGCAGGGTTCCGTAGGGTAGGCCCAACTGAAGGTTTTAGCGTTAGCCCTTCCGCTCGTTTCGGCGCTAAATTGACGGACGCGCATGTGGGCGATTTTGTGGCTAATTCATCTCCTACGGCATCGGGTACTTATGCGTGGGTATGCGTTAATCAAACAACAAAAACATTCAGTTCTATCGCATTGAGTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ff16cebe63346992dca0ef341a95f3a06bf0e2ba461bf45e81c7d3dce275ed7d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9150
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50