Protein

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Genbank accession
YP_010109792.1 [GenBank]
Protein name
tail collar fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAGNLIYITDAGRAALVAPGNTGTTAHQVTQIGLSTAAFVFKPDMTALPSELKRITTFGGDTVANDTIHIVIQDDSADQYKLYGFGLYLDNGVLFGVYVQNDPILEKAAASMLLLAADTVFTSIDVTKLVFGPTSFLNPPATTERKGVVELATQAEVDDGADDTRAVTPKTVASRYAALVGARFTGDIGAPNYFVTGRGAVNRWRIGKSDTDDFALNAFDEDGVTQRRVVEIARASQVVNFAKRPMWAGATPWDSANVTPLDKNVGGQVNGTVTLYGASDYGSQLVFNSNGYAPRIQVQASAAKWMVTNGANTAANLAVSDGGTVTARGELQAGGGTSVVAPDGNLSGSQWGGWLSNFLPNNYVNRAGTTMWGRLTLARDGWDADFGLRAADGAQTYLRARRAGGLELINNAYNAVTWSVDDWGTMYMRGQQILNTDGNLFCSYRGAWMNAILDDLYNRDNSKANAGARVQWDSGVNNFGTVDRLNGALPAPWVVCGLSGPGNGTANAITVYGVVLRNQ
Physico‐chemical
properties
protein length:519 AA
molecular weight: 55093,79090 Da
isoelectric point:5,05636
aromaticity:0,09249
hydropathy:-0,12794

Domains

Domains [InterPro]
DC_1466
ATT
1–175
DC_1466 G3DSA:6.20.70.20 DC_2017
YP_010109792.1
1 519
Architecture
ATT
RBD
RBD
ATT 1-175 | RBD 335-363 | RBD 461-519
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Burkholderia phage Mana
[NCBI] 		2767578 Uroviricota > Caudoviricetes > Peduoviridae > Aptresvirus mana >
Host Burkholderia gladioli
[NCBI] 		28095 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010109792.1 [NCBI]
Genbank nucleotide accession
NC_055863.1 [NCBI]
CDS location
range 12369 -> 13928
strand +
CDS
ATGGCTGGAAACCTCATCTACATCACGGACGCCGGCCGCGCCGCACTGGTGGCACCCGGCAACACCGGGACCACCGCGCACCAGGTCACGCAGATTGGCCTCTCCACGGCGGCCTTCGTGTTCAAACCGGATATGACCGCGCTGCCAAGCGAGTTGAAGCGCATCACGACGTTCGGCGGCGATACCGTCGCCAACGACACGATCCACATCGTGATCCAGGACGACAGTGCGGACCAGTACAAGCTGTACGGGTTCGGGCTGTACCTGGACAACGGCGTGTTGTTCGGCGTCTACGTGCAGAACGATCCGATCCTCGAAAAAGCGGCAGCCTCGATGCTGCTGCTGGCCGCCGATACCGTGTTCACCTCGATCGACGTGACGAAGCTCGTTTTTGGGCCGACGTCGTTCCTCAATCCGCCGGCGACGACCGAGCGCAAGGGCGTTGTCGAACTGGCGACGCAGGCCGAGGTCGACGACGGCGCGGACGACACGCGCGCCGTGACGCCGAAGACTGTAGCGAGCCGATATGCCGCGCTCGTGGGCGCGCGCTTCACCGGCGATATTGGCGCGCCGAACTACTTCGTCACCGGCCGGGGTGCGGTCAACCGATGGCGGATCGGCAAATCCGATACTGACGATTTCGCGCTCAACGCATTCGACGAGGATGGTGTCACGCAGCGGCGCGTCGTGGAAATCGCGCGTGCCTCCCAGGTCGTCAACTTCGCGAAGCGCCCGATGTGGGCCGGTGCGACGCCGTGGGACAGCGCAAACGTCACGCCACTCGACAAGAACGTCGGCGGTCAGGTCAATGGAACTGTGACACTGTATGGCGCGAGCGATTACGGGTCGCAACTCGTCTTCAACTCGAACGGGTACGCACCGCGGATTCAGGTGCAGGCGTCGGCGGCCAAGTGGATGGTCACGAATGGCGCGAATACGGCCGCGAACCTGGCAGTCAGCGATGGCGGCACCGTCACAGCGCGCGGCGAATTGCAGGCCGGCGGCGGTACGTCGGTGGTCGCGCCCGACGGAAACCTGTCCGGGAGCCAATGGGGTGGATGGCTGTCGAATTTCTTGCCGAACAACTACGTCAACCGCGCTGGCACGACGATGTGGGGCCGCCTCACGCTCGCGCGAGATGGATGGGACGCGGACTTCGGTTTGCGCGCGGCCGATGGCGCACAGACGTACCTGCGCGCACGGCGCGCTGGCGGCCTTGAACTCATCAACAACGCGTACAACGCCGTCACATGGTCTGTAGACGACTGGGGCACGATGTACATGCGCGGCCAGCAGATCCTCAACACGGACGGCAACCTGTTCTGCTCGTATCGCGGTGCGTGGATGAACGCCATCCTCGACGATCTGTACAACCGCGACAACTCGAAGGCCAACGCCGGCGCGCGCGTGCAGTGGGATTCCGGTGTGAACAATTTCGGCACGGTAGACCGGCTCAACGGCGCATTGCCCGCGCCGTGGGTCGTCTGTGGTCTAAGCGGTCCGGGTAACGGCACGGCCAACGCGATCACTGTCTACGGCGTCGTTTTGAGGAACCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
692f87c01e3b9e4ee9e02f89bff5730a44cea610db3c0cbc9c1409da22c58ae1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7970
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Burkholderia gladioli phage Mana Godoy,B.A., Yao,G.W., Guadalupe Vizoso-Pinto,M., Gonzalez,C., Gill,J. and Liu,M. 2021-05-20 — GenBank