Protein

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Genbank accession
YP_008126344.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,63
Protein sequence
MSTLRVSKLAGTANSLNQVTVPAGKKLKIGADASLDLSGLDTALQLPAGTTAQRPGSPATGYWRYNTSDNAFEIYTGSAWTSLSAAATGASAIIRDGSSAVAAADNPGDAFAAGLTSGNQVWLNVGDTVLPYEYDPSDRFGTGDEGWALMNHTWFGTYGPSHLVDYRSYGSPHTILPSFGTNYDARAGRTTIQNGTFRIGLNAQHAGGNSLSTIRIQMPKMTKARYYKDNRQNGGADTADYGSFTQNFDGINRNSPYQDNGSGYWQVIWSGRDSNQGGSVGNDWMIMDNGNNNQNGYVSSVQSFGAGKPSTDPWAIWGTTDAYREYVNYTQWRIWFH
Physico‐chemical
properties
protein length:337 AA
molecular weight: 36367,20390 Da
isoelectric point:5,92867
aromaticity:0,11869
hydropathy:-0,55994

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-IOM18
[NCBI] 		754039 Uroviricota > Caudoviricetes > Pantevenvirales > Tefnutvirus > Tefnutvirus siom18
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_008126344.1 [NCBI]
Genbank nucleotide accession
NC_021536 [NCBI]
CDS location
range 18532 -> 19545
strand +
CDS
ATGTCAACACTAAGAGTATCAAAATTAGCAGGAACTGCAAACTCACTTAATCAAGTGACAGTTCCTGCTGGTAAAAAATTAAAGATTGGTGCTGATGCATCATTGGACCTGAGTGGATTAGACACTGCATTACAACTTCCCGCAGGAACAACCGCTCAACGTCCTGGTTCTCCTGCCACTGGTTATTGGAGATATAATACTAGCGATAATGCATTTGAAATTTATACTGGTAGTGCATGGACATCATTAAGTGCAGCAGCAACTGGTGCTTCTGCTATTATTAGAGACGGTTCTAGTGCAGTTGCAGCGGCAGATAATCCTGGTGATGCATTCGCTGCTGGATTAACTTCTGGTAATCAAGTATGGTTGAATGTTGGAGATACTGTTCTTCCATATGAATATGACCCATCAGATCGATTTGGAACAGGTGACGAAGGTTGGGCATTGATGAATCATACTTGGTTTGGTACATATGGACCTTCTCACTTAGTTGATTATAGAAGTTATGGTAGTCCTCACACTATTCTGCCTTCTTTTGGTACTAATTATGATGCTAGAGCAGGTAGAACTACCATTCAAAATGGAACATTTAGAATTGGACTAAACGCACAGCACGCTGGTGGTAACTCTTTGTCCACAATTCGTATTCAAATGCCTAAAATGACCAAGGCACGTTATTATAAAGATAACAGGCAAAATGGTGGTGCTGATACTGCTGACTATGGTTCTTTCACTCAAAACTTTGATGGTATCAATAGAAATTCTCCTTATCAGGACAATGGTTCTGGTTATTGGCAGGTAATCTGGAGCGGCAGAGATAGCAACCAAGGCGGTTCAGTCGGTAATGATTGGATGATTATGGATAACGGTAACAATAACCAAAACGGTTATGTAAGTTCTGTTCAGTCATTTGGTGCTGGTAAACCATCAACTGACCCTTGGGCAATTTGGGGTACAACTGACGCATATCGTGAGTATGTTAATTATACGCAATGGCGTATTTGGTTCCACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
36a61dd7963fc128831db0731ee173cf6b52123c6bf30498f97980920e52a9ea
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3872
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-IOM18 Henn,M.R., Clokie,M., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Fitzgerald,M.F., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank