Protein

View in Explore
Genbank accession
XYL45840.1 [GenBank]
Protein name
long tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKKTVNLYLRGITSAVVGRPSPPSENDSDWVNNNVQLNKYDLTSFTIGGHARAWICGFGAIYSNGAWDDVGSLTSVSGYGWMGDWANKQFLKLVGAVRQLNVMLSWLLERKHGNEWCIVSDGHHSMTDRSNLGHWGQLVHYIEKRNPGTQKYTMQQLMAGANGFTHDPKFFRQYGGVILLLSSPTRSMPQDFANVIAAALKEGQSLIVLQWDAGAGHLNFENIFYPNFGININGASRIVATAQACAAYRAFYGNHLIWSAAGLLNDPQQDALLKRIGELHFEKATRTSENYWFQRVPNQADQPILNGQPGEWWPFWRGEVDIPADEVNHDDVIEVKFNCCMAMGDVYKRDGMNFYSQPYKPDDAAPHDWQTGLNRGTHVITWNEDHPVDWSKVKLFSRVVGLGAYSANGSNPMLAGFSYVNGAYYRDTRGLNVYVISKASMQLVDRRIFDIHGSSGQGSVDGQQAAGACAAYLNQWGGDVWIMVTMFDDCSHNRLVGGLPAALYRLGASRTVFESPKFAYRAAYHLLGSPGLAEGQAISEMYRGEKSSSADAFFDVCFEFDHDGWPQQIGIPFLEQRSTIYSRVVGFQVRGASGFPGHYPPGRSVNRGYTVVSGVRYFDSRGFNVYVIDKDTHKVKDRRVFDLHGNGVEGGDGVQAAINCAAFLNSLPDDSCYVMVTMWDECSINRLQGGLPQAMYRIGASSEAYESKYFRYRSAYHVLGIPGIKEGNAVSELYRGYKSGDPDAYFEVGFNFNEFNEIYCTGTEKEFVFAMTGGLNHMQAGTFAYMRTLQDIDGGMTVGRDYNVKLRDVRFQKLPMWDEQESIIKFENPCVNIMNYPAITINDVSLTEGHSGQQWVTFTVTASEPIMGRPLTVRARTQDGTARALSSETSVKNIGSDERGIPVLQYLDYSNTRVVLDGGFPKYYNSSFDVDRDNNIKKFVKNSLDWLNRGRNAKVLITGDVYPGAPSPTTNYSIKGSAPTDFGVALPNYIRALGYQVDILGWTEMDGGAPSALVFDKYSVVLLFSSAYARLDSPPLGVSFCRSLENSVRRGTGLMLITDHLDEAGGMGFASSANQLAHRFYAHFSGNFDRQYIDIDQVRATQGEHPLIRGMTGKMNAFGSESRVDSNGSVGDPQDYVPVDTELTIDVGQTQATVSVLVNGDTLVEGEEYFWMLLYDLSRGEFTKDRGRCVIYDDDGTPFGSNASSGGQGVEWRRQLYRNTTGVFIVNSEHYTVPDRFDVFHDTWWVGGQPRPSPGVKPPYDYPGGPIHGFLPAQGGQWHLYLPHYAELDYTTFYDMRMQGTGSGTAWDYSTAEDTVKPVWGSYGMSAQQVRIHDTRTSGRSGPFRIKFTYNGGGLFILSRVGQEYLRVSGSGVYYMDHDPTRDFMYIEVKVDDGAYYNGQHSGGGQNGGMGTYSLEVI
Physico‐chemical
properties
protein length:1418 AA
molecular weight: 157677,34150 Da
isoelectric point:5,72030
aromaticity:0,12412
hydropathy:-0,37334

Domains

Domains [InterPro]
DC_0476
STR
1–599
DC_0476 DC_0476
PS52031
LEC
394–569
PS52031 PS52031 IPR038081
IPR039477
STR
429–529
IPR039477 IPR039477 IPR003644
IPR038081
ATT
1127–1197
IPR038081
XYL45840.1
1 1418
Architecture
STR
ATT
STR 1-1116 | ATT 1117-1226 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYL45840.1
1 1418
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0101
Central domain 11 419 410 0,8730
C-terminal 420 1418 998 0,1583
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-419
C-terminal
420-1418

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage vB_AerVM_332-Igor
[NCBI] 		3414681 Viruses >
Host Aeromonas veronii
[NCBI] 		654 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL45840.1 [NCBI]
Genbank nucleotide accession
PQ474294.1 [NCBI]
CDS location
range 91498 -> 95754
strand -
CDS
ATGAAGAAGACGGTGAATCTCTACCTACGAGGAATCACCAGCGCAGTAGTGGGGCGGCCATCGCCCCCTAGTGAAAACGATAGTGACTGGGTGAATAACAACGTACAGCTCAACAAGTACGATCTCACCAGCTTCACAATCGGCGGACACGCTCGCGCATGGATTTGTGGCTTCGGTGCCATCTACTCTAACGGTGCTTGGGATGACGTTGGATCACTGACGTCAGTTTCCGGATACGGTTGGATGGGTGACTGGGCGAACAAACAGTTCCTCAAGTTGGTCGGCGCAGTACGTCAACTCAACGTCATGCTCTCTTGGCTGCTTGAGCGTAAGCACGGCAACGAGTGGTGCATCGTTAGTGACGGCCACCACTCAATGACTGACCGCAGCAACCTCGGTCATTGGGGCCAACTCGTTCACTACATCGAGAAGCGCAATCCCGGAACGCAGAAGTACACCATGCAGCAACTCATGGCAGGCGCAAACGGATTTACACACGACCCGAAATTCTTCCGGCAGTACGGCGGTGTTATTCTGCTGCTGTCTTCGCCGACGCGATCCATGCCACAAGATTTCGCTAACGTGATCGCCGCTGCCTTGAAGGAAGGTCAATCGTTGATCGTGTTGCAGTGGGATGCGGGTGCCGGACACCTGAACTTCGAAAACATCTTCTACCCGAACTTCGGCATCAACATCAACGGCGCAAGTCGTATTGTGGCGACCGCGCAGGCATGTGCAGCGTACCGCGCGTTCTACGGCAACCATTTGATTTGGAGTGCAGCGGGTTTGCTTAATGACCCGCAACAGGACGCGCTGTTGAAACGGATCGGTGAGCTGCACTTTGAGAAAGCAACGCGCACCAGTGAGAACTACTGGTTCCAGCGCGTGCCTAATCAGGCAGACCAGCCGATTCTCAACGGGCAACCCGGCGAGTGGTGGCCGTTCTGGCGCGGTGAAGTTGACATTCCGGCAGACGAAGTGAACCACGACGACGTTATTGAAGTGAAGTTCAATTGCTGTATGGCAATGGGTGACGTATACAAGCGCGACGGCATGAACTTCTACTCGCAACCGTACAAGCCTGATGACGCGGCTCCGCATGATTGGCAAACTGGTTTGAATCGTGGTACGCACGTAATAACGTGGAACGAAGACCATCCGGTGGACTGGTCGAAAGTGAAACTGTTCTCGCGAGTTGTCGGCCTCGGTGCCTACTCCGCTAATGGCAGTAATCCGATGCTCGCGGGATTCAGTTACGTGAACGGCGCGTACTATCGCGACACGCGCGGCCTCAACGTCTACGTGATTTCGAAAGCCTCAATGCAACTCGTAGATCGTCGTATCTTTGACATTCACGGGTCTAGCGGTCAGGGCTCTGTTGACGGCCAGCAAGCCGCAGGCGCGTGCGCAGCCTACCTCAACCAGTGGGGCGGCGACGTCTGGATCATGGTGACGATGTTCGATGATTGCAGCCACAACCGTTTGGTCGGTGGACTGCCTGCCGCACTGTATCGCCTCGGGGCCAGCCGCACGGTTTTCGAATCTCCGAAGTTTGCGTACCGCGCTGCCTATCACTTGCTCGGGTCTCCCGGATTAGCAGAAGGGCAGGCAATCAGCGAAATGTATCGCGGTGAGAAATCATCTAGTGCCGATGCGTTCTTCGACGTGTGCTTTGAGTTCGACCACGATGGGTGGCCGCAACAAATCGGCATTCCATTCCTCGAACAGCGCAGCACTATCTATTCGCGCGTTGTCGGATTCCAAGTGCGTGGCGCAAGTGGTTTCCCCGGACATTACCCTCCGGGTCGTAGCGTGAACCGTGGCTACACCGTAGTGAGTGGCGTGCGATACTTTGATTCGCGCGGATTCAACGTTTACGTTATCGACAAGGATACGCACAAAGTAAAAGATCGTCGCGTGTTCGACCTGCATGGTAACGGCGTTGAAGGTGGTGACGGTGTGCAAGCTGCAATCAACTGTGCAGCGTTCCTCAATAGCCTGCCTGATGATTCCTGCTACGTGATGGTAACGATGTGGGACGAGTGCAGTATCAACCGCCTACAAGGTGGACTGCCCCAAGCCATGTACCGGATCGGTGCGAGTTCCGAGGCTTATGAATCGAAATACTTCCGCTACCGTTCGGCGTATCACGTTCTCGGTATCCCAGGCATTAAGGAAGGCAATGCGGTTTCCGAACTCTATCGCGGTTACAAGTCGGGAGACCCCGATGCGTATTTCGAAGTCGGATTCAACTTCAACGAGTTCAACGAGATCTATTGCACTGGGACGGAGAAGGAGTTTGTGTTTGCGATGACTGGCGGCTTGAACCACATGCAGGCCGGAACATTCGCTTACATGCGCACGCTGCAAGACATTGATGGCGGGATGACAGTCGGACGTGATTACAACGTGAAGCTGCGTGATGTGCGCTTCCAAAAGCTGCCGATGTGGGACGAACAAGAATCTATAATCAAGTTCGAAAACCCCTGCGTCAACATCATGAACTATCCGGCGATCACCATTAACGACGTGTCGCTAACGGAAGGTCACAGCGGCCAACAGTGGGTGACATTCACAGTTACCGCAAGTGAGCCGATCATGGGTCGCCCCCTGACTGTCCGTGCTCGCACTCAAGATGGTACTGCGCGTGCGCTGTCTTCCGAAACCAGCGTGAAGAACATCGGCAGCGACGAGCGCGGTATTCCGGTGCTGCAATATCTTGACTACTCGAACACTCGCGTGGTTCTCGATGGTGGCTTCCCGAAATACTACAACAGTTCGTTCGACGTTGACCGCGACAACAACATCAAGAAGTTTGTGAAGAACAGCTTGGACTGGCTGAACCGTGGACGTAACGCGAAGGTGTTGATCACTGGTGACGTTTACCCAGGTGCGCCCTCCCCGACAACCAACTACTCTATCAAAGGCAGTGCGCCCACTGACTTCGGTGTTGCGCTCCCCAACTACATCCGGGCACTCGGGTATCAAGTTGATATTCTCGGCTGGACTGAAATGGATGGTGGTGCGCCTTCTGCGCTGGTGTTCGACAAATACTCCGTGGTTCTGTTATTCAGTTCTGCGTATGCGCGGCTCGATAGTCCGCCGCTCGGGGTGTCGTTCTGCCGCTCGCTGGAAAACTCCGTGCGTCGCGGTACGGGTTTGATGTTGATCACCGACCACTTGGATGAAGCTGGCGGTATGGGCTTTGCATCCAGTGCGAACCAACTAGCCCACCGTTTCTACGCACACTTCTCTGGTAACTTCGACCGCCAGTACATCGACATTGATCAGGTTCGTGCAACTCAAGGCGAACATCCCCTGATCCGTGGCATGACGGGTAAGATGAATGCGTTCGGTAGTGAGTCGCGCGTTGACAGTAACGGCAGCGTCGGCGATCCGCAAGACTACGTTCCTGTAGACACCGAGCTGACAATCGACGTCGGTCAGACGCAAGCCACGGTGAGCGTGCTGGTGAATGGCGACACGTTGGTGGAAGGCGAAGAGTATTTCTGGATGTTGCTCTACGACCTGTCGCGTGGTGAGTTCACCAAAGACCGTGGTCGTTGTGTTATCTACGACGATGACGGTACGCCGTTTGGCTCGAACGCGAGTTCCGGTGGGCAGGGCGTTGAGTGGCGTCGCCAACTTTACCGCAACACTACGGGCGTATTCATTGTCAACTCCGAGCACTATACGGTGCCTGACAGATTCGACGTGTTTCATGATACGTGGTGGGTCGGCGGGCAACCTCGCCCAAGTCCCGGTGTAAAACCGCCGTACGATTATCCGGGCGGGCCGATTCACGGTTTCCTTCCAGCGCAAGGCGGCCAATGGCATTTGTATTTGCCGCACTACGCAGAACTCGACTACACGACGTTCTATGACATGAGGATGCAAGGTACGGGTTCCGGTACTGCGTGGGATTACAGCACAGCGGAAGACACTGTGAAACCTGTGTGGGGTTCGTACGGTATGAGCGCGCAGCAGGTTCGCATTCACGACACGCGAACCAGTGGGCGCAGCGGCCCTTTCCGAATCAAGTTCACGTATAATGGTGGCGGCTTGTTCATTCTGTCGCGTGTAGGGCAAGAGTATTTGCGCGTTAGTGGTTCCGGTGTTTACTACATGGATCACGACCCGACGCGAGACTTCATGTATATCGAAGTCAAAGTCGATGACGGCGCATATTACAACGGCCAGCACAGCGGCGGTGGTCAGAATGGCGGCATGGGCACGTATTCTTTGGAGGTAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
80233307a90558e16ed94c25a8e3ec157d79013517c40a66ec932fa70e4b2da0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5631
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Giant Phages vB_AerVM_332-Vera and vB_AerVM_332-Igor and Siphophage vB_AerVS_332-Yulya Infecting the Same Aeromonas veronii Strain Babkin,I.V., Morozova,V.V., Kozlova,Y.N., Fedorets,V.A., Tikunov,A.Y., Ushakova,T.A., Bardasheva,A.V., Zhirakovskaya,E.V. and Tikunova,N.V. 2025 — GenBank