Protein

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Genbank accession
YP_007010398.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MADLKSSSTAGGGLVWTQTNLPFSPQDVKLFYNGNEVIDSVSNQSIGGAKTFTGTLTYKTPVNSNEVAIKGYVDNLDSSSVKSVTGTLPIVVTTGVSPRVSINNATQTAHGAMSKEDKTKLDGLPVRAVNRDGDTMTGNLMVNGQVEANRIKSNGQVEVYDSATNTYAQRLVASGSLLYFQGGKVDRDVTDQRIAFSGWYGTPLTQVRFNMATGVNPQVSYGNTNYDIFHKGNLPSAEEVKAMAVYERPPEDDCDKAIMPGNYGIFANTKNTPNGTGPSGSTLLVTKWGNGANAQIFFSYTENRVWVRRQYIGVWQPWAEMYTSLNKQPVGGMGLGVGDGPNATTVTGGVRDFNLVKTTGVFTVDGSWANGIDNSPTASTHTGMVEVKQRSFDNMTIQTFYYHVNVADLTTQRAYTRIWQNASTGWSPWIPTGVWEQVNTYRSGVLRHNNSTNDDSVYPYVSYTKEKYRDGVAAGIAYTIGELGFRAGATNRYDPHSADLLARIIGQAENTTIPNEYEGRLFLASRWRRGSDGSTGDTSTLVLSRASGAEFTHAGKKVGINTGVVSAEKYSVTASGYALQYEANAQQGVYFDNRTILGGASNNTSGVVIRPNGSGTATGETTFNSNGTISNNQAPSSSNNLTNKAYVDGVALGGFSSIITLKDTDNLNDIKTSGIYSQVANAKALTSLNYPVEKAGNLIVTTSAGVIQKYWVYNSSEVWSRAQYNTGAWKPWYRDYNEEFKPTSADVGALSLTGGTVTGDVRFNSGNTTRLSLGSGSDYYVERSPSGLTLASGTINPKVRVNNTDYDIYHVGNKPTAVDVGTMTTAQINTELNKKLNLSGGTLTGTLTIQASAPQIWMDETDNSSSKFGFVVDGATIRLNKDTSSGLAIFKYQTDGTFAIANPVSSTSQYDHASALTRKDYVDSRVSTGLPLSGGTMTGPIIVANTKGAIKVDNQKSISFQDQANTMYHLFAEGNYLKVKHGNAGENQILQISAAGVESSTTVFARGGLISQDSTSTKWLSMETPANANPYIAVRATGDTVNRVAMTFEKGAIRVATDTLVSPSMLIENNGGLVLAPNTSRTGVTWGMGIDASTREFNIHRYLDGVLQQLPVTIATDGTFKANAGLYATTLTVANNATVNGSIRTGSIDVGGYISLTSAGNTLIEFHTPGRTAAMIYKGQDGNLRFVTSNGSAGETLLRMQLDTDGNIALRGALNAGTNVTGNGVYDAGNRVYSASNPIPDGVILRSVVNGGGNMDIGSYAMITVKANLGPLGPGAVLQGTQIQFSNAEGTNLVACNYGTWRLMGVSRAQSQNSDGWGSWNVTLAQRIT
Physico‐chemical
properties
protein length:1329 AA
molecular weight: 141695,51500 Da
isoelectric point:7,21528
aromaticity:0,08427
hydropathy:-0,31550

Domains

Domains [InterPro]
DC_0505
ATT
1–518
DC_0505 DC_1909 DC_1389
cd19958
STR
260–322
cd19958 cd19958 DC_1924
YP_007010398.1
1 1329
Architecture
ATT
STR
STR
RBD
ATT 1-518 | STR 593-843 | STR 858-1100 | RBD 1101-1329
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007010398.1
1 1329
Domain Start End Length (AA) Confidence
N-terminal 1 515 515 0,2668
Central domain 516 731 217 0,2637
C-terminal 732 1329 597 0,7936
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-515
Central
516-731
C-terminal
732-1329

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage CC2
[NCBI] 		1204516 Uroviricota > Caudoviricetes > Pantevenvirales > Emmerichvirinae > Ceceduovirus
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007010398.1 [NCBI]
Genbank nucleotide accession
NC_019538.1 [NCBI]
CDS location
range 206877 -> 210866
strand -
CDS
ATGGCAGACCTTAAGAGTTCGTCTACCGCTGGGGGTGGATTAGTTTGGACACAGACTAACCTACCATTTTCCCCGCAAGACGTTAAGCTGTTTTATAATGGTAATGAGGTTATTGATAGTGTTAGTAATCAATCTATTGGTGGGGCTAAAACCTTTACCGGAACATTGACATATAAAACTCCTGTCAATTCTAATGAAGTTGCCATTAAAGGTTATGTTGATAACCTAGATAGTTCATCGGTGAAATCTGTAACAGGGACTCTCCCAATCGTCGTTACAACCGGTGTAAGTCCGCGAGTTTCAATTAATAACGCAACACAAACCGCCCATGGGGCAATGAGTAAAGAAGACAAAACAAAACTTGACGGTTTGCCTGTTCGAGCTGTTAATAGAGATGGCGACACTATGACTGGAAACCTAATGGTTAACGGTCAAGTCGAGGCGAATAGAATCAAGTCCAACGGTCAAGTTGAAGTTTATGATTCTGCTACCAATACATATGCACAACGTCTGGTTGCATCTGGTTCCTTACTTTATTTCCAAGGTGGTAAAGTAGATAGAGACGTCACAGACCAAAGAATTGCCTTTAGTGGTTGGTATGGTACACCTCTCACTCAAGTAAGATTTAATATGGCTACTGGGGTTAATCCTCAAGTGTCCTATGGAAATACAAACTATGATATTTTCCATAAAGGTAATTTGCCTAGTGCGGAAGAAGTAAAGGCGATGGCGGTATATGAGCGTCCACCAGAAGATGATTGCGATAAAGCAATTATGCCCGGTAACTATGGTATCTTTGCCAATACCAAAAATACACCAAATGGAACTGGTCCTAGTGGTTCGACTCTTCTTGTTACCAAATGGGGTAATGGGGCTAATGCTCAAATATTCTTTTCTTATACAGAAAATAGAGTATGGGTTCGTCGTCAATATATCGGTGTTTGGCAGCCTTGGGCTGAGATGTATACATCTTTGAACAAACAACCTGTTGGTGGTATGGGTCTTGGTGTTGGTGATGGTCCAAACGCAACAACCGTAACTGGTGGGGTTCGTGATTTCAACCTAGTTAAGACAACTGGTGTGTTTACTGTTGATGGTAGTTGGGCAAATGGTATTGATAATTCACCAACTGCATCCACACATACTGGTATGGTAGAAGTTAAGCAACGTTCTTTTGATAATATGACTATTCAGACATTCTATTATCATGTGAATGTTGCAGACCTAACCACACAACGTGCATACACACGGATTTGGCAGAATGCGTCTACTGGTTGGAGTCCTTGGATACCTACTGGTGTTTGGGAACAAGTTAACACCTATAGATCTGGGGTATTAAGACACAATAACTCAACTAATGACGATTCGGTTTATCCTTACGTATCTTATACCAAGGAAAAGTATCGTGATGGTGTTGCTGCTGGTATTGCTTATACAATAGGTGAACTAGGATTCCGAGCTGGGGCAACTAATAGATATGACCCACATAGCGCGGATCTACTAGCTAGAATAATTGGTCAGGCAGAAAATACAACAATCCCTAACGAATATGAAGGTCGTTTGTTCTTAGCTTCCAGATGGCGTCGTGGTTCTGACGGATCGACAGGTGATACAAGTACGTTGGTTTTAAGTAGAGCTTCTGGTGCGGAATTCACTCATGCTGGCAAGAAAGTAGGTATTAATACTGGCGTTGTTAGTGCGGAAAAATACTCAGTAACTGCTTCTGGTTATGCACTACAATATGAAGCAAATGCACAACAAGGTGTTTATTTTGATAACCGAACTATTTTGGGCGGGGCTTCGAATAATACATCTGGTGTTGTAATCAGACCAAATGGTTCCGGAACTGCAACTGGTGAGACAACATTTAACTCGAATGGTACAATATCCAATAACCAAGCACCTTCATCTTCAAATAACCTTACCAATAAGGCATATGTTGATGGTGTTGCTCTTGGTGGTTTTAGTTCTATTATTACATTGAAAGATACTGATAACCTCAACGATATAAAAACCTCTGGTATATATAGCCAAGTTGCCAACGCTAAAGCATTGACTAGTTTGAACTATCCAGTTGAGAAAGCAGGTAACTTGATTGTTACTACTTCTGCTGGTGTAATTCAAAAATATTGGGTATATAACTCATCCGAGGTTTGGTCTCGTGCTCAATATAATACAGGGGCATGGAAACCATGGTATCGTGATTATAACGAAGAGTTTAAACCTACTTCTGCTGATGTTGGAGCGTTGTCTTTAACTGGTGGTACTGTAACCGGGGATGTTAGATTTAACTCTGGTAACACAACAAGATTGTCTCTTGGTAGTGGATCTGATTATTACGTTGAACGTTCGCCATCTGGTTTAACATTAGCTTCTGGTACTATTAATCCGAAGGTTAGAGTTAATAACACCGACTATGATATCTATCATGTTGGTAATAAACCAACTGCGGTTGATGTTGGAACGATGACAACCGCACAGATCAATACGGAGCTTAACAAAAAGCTTAATTTGTCTGGTGGGACATTGACCGGTACTTTGACAATTCAAGCCAGCGCCCCGCAAATTTGGATGGATGAAACCGACAACAGTTCCAGTAAATTTGGTTTTGTAGTAGATGGGGCCACTATCCGTTTAAACAAGGATACATCAAGCGGTCTTGCTATTTTCAAATATCAAACGGATGGAACATTCGCCATTGCAAACCCAGTATCATCGACGTCTCAATATGATCATGCATCAGCACTTACTCGCAAAGATTATGTTGATAGCCGAGTATCAACGGGTTTACCTCTTTCTGGGGGAACAATGACTGGACCTATAATTGTTGCTAATACTAAAGGCGCAATTAAAGTTGATAACCAGAAATCTATTAGTTTCCAAGACCAAGCCAATACAATGTATCACTTGTTTGCCGAGGGTAATTACCTAAAAGTTAAACATGGTAATGCAGGTGAAAACCAGATTTTGCAAATTAGTGCTGCTGGTGTTGAGTCGAGTACTACTGTTTTTGCAAGAGGTGGATTGATCTCTCAAGATTCAACCAGTACTAAATGGTTGAGTATGGAAACCCCAGCTAACGCTAACCCATATATTGCTGTTCGTGCGACGGGTGATACCGTAAACCGAGTTGCAATGACATTCGAAAAAGGTGCCATTCGTGTTGCGACGGATACTCTAGTTTCTCCGTCAATGCTGATTGAAAATAACGGTGGTCTGGTTCTTGCACCAAATACTTCTCGTACCGGCGTAACGTGGGGGATGGGTATTGATGCAAGCACACGGGAATTTAATATCCATAGATATTTGGATGGTGTGTTGCAACAGTTACCGGTTACTATTGCAACAGATGGAACATTTAAAGCTAATGCAGGTCTTTACGCAACAACGTTAACAGTAGCCAATAATGCTACCGTGAATGGCTCGATACGTACTGGTAGCATTGATGTAGGTGGTTATATTTCACTCACGAGTGCCGGTAATACATTAATTGAGTTTCATACACCGGGTAGGACAGCAGCAATGATCTACAAAGGACAAGATGGCAATCTGAGATTTGTTACTTCAAATGGTTCTGCTGGTGAAACGCTTTTAAGAATGCAATTGGATACCGATGGTAATATTGCATTAAGAGGTGCGTTGAATGCAGGAACCAACGTTACAGGAAATGGTGTTTATGACGCTGGTAACCGTGTTTACTCTGCATCAAACCCAATCCCAGATGGTGTGATATTACGTTCCGTTGTTAACGGTGGTGGTAATATGGATATTGGATCTTATGCAATGATCACGGTTAAAGCCAACCTTGGTCCACTTGGTCCGGGTGCGGTCCTACAAGGGACACAGATCCAGTTTTCTAACGCAGAAGGTACTAACCTCGTTGCTTGTAACTATGGAACTTGGAGATTGATGGGGGTGTCAAGAGCACAATCACAAAACTCTGATGGTTGGGGTTCTTGGAACGTCACACTTGCACAACGCATTACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a9bc4bf1ac0f2cb1ab2846c9f275ac491d6b1b2bab6ec1f788a408d3160b00e9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5613
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50