Protein

View in Explore
Genbank accession
QIG75633.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLRLTKNLEPLRVAAEKEIDVVAEGVRGLFITPGSGQSMIYTQKEKEAELVSADPNVDQAEIPHIVLEAEMNGITLLDQAAIILTMAYQWRELSSRIEVARLAGKGQVRAAETPAEIAQSCTAAKETLTGVATGFGLAYNGQ
Physico‐chemical
properties
protein length:142 AA
molecular weight: 15269,28940 Da
isoelectric point:4,82531
aromaticity:0,04225
hydropathy:-0,02606

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y2_11
[NCBI] 		2509589 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG75633.1 [NCBI]
Genbank nucleotide accession
MN988547.1 [NCBI]
CDS location
range 49765 -> 50193
strand +
CDS
ATGCTTAGACTGACCAAGAACCTTGAGCCGCTGCGCGTTGCGGCCGAGAAAGAAATCGACGTCGTCGCGGAAGGTGTGCGCGGCCTCTTCATCACGCCTGGCTCCGGACAGTCGATGATCTACACTCAGAAGGAGAAGGAGGCCGAGCTTGTCAGCGCGGATCCGAATGTCGACCAGGCCGAGATCCCGCATATCGTGCTCGAGGCTGAGATGAACGGCATCACGCTGCTCGATCAGGCCGCAATCATTCTCACCATGGCCTATCAATGGCGCGAGCTCTCCAGCCGCATCGAGGTCGCGCGCCTGGCCGGCAAGGGGCAGGTGAGGGCGGCCGAAACGCCGGCAGAAATTGCGCAAAGCTGCACCGCGGCAAAGGAAACACTGACAGGAGTTGCCACCGGATTCGGTCTTGCCTATAATGGTCAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
73ac3c590aec52a00e4f825a348ca9d4b5772dbd37f6d9c1d70916b878f2af64
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9301
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank