Protein

View in Explore
Genbank accession
QHR70555.1 [GenBank]
Protein name
hinge connector of long tail fiber distal connector
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MADLKLGSTAGGSVIWHQGNFPLTPVSNDILYKTYKIYTEFNKPQAADNDFVSKANGGNYLGTVNFDKDLQFKDSDGYWVKLGRKTNTTPMSSTYSFSFRMSKGMGLETADGTPFVIFDPSTTVGANRLTVMGDILGRQIKDESGRVFSPGNTPTKAQVGLSDVDNAKQVQINNSNIQSMAGVLSAPNFISRNPGTLNEHVPRIDQVVLRGTSEDFGYY
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23900,43180 Da
isoelectric point:6,73107
aromaticity:0,10046
hydropathy:-0,42831

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QHR70555.1
1 219
Domain Start End Length (AA) Confidence
N-terminal 1 168 168 0,4373
Central domain 169 208 41 0,3703
C-terminal 209 219 10 0,6392
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-168
Central
169-208
C-terminal
209-219

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage dhaeg
[NCBI] 		2696391 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QHR70555.1 [NCBI]
Genbank nucleotide accession
MN850609 [NCBI]
CDS location
range 8236 -> 8895
strand -
CDS
ATGGCTGATTTAAAATTAGGCTCAACCGCTGGAGGTTCCGTTATATGGCACCAAGGTAACTTTCCGCTGACGCCGGTATCAAATGATATTTTATATAAAACCTACAAAATCTATACCGAATTTAATAAGCCCCAAGCCGCAGATAACGACTTTGTTTCTAAAGCCAACGGTGGGAATTATTTGGGTACTGTAAACTTTGATAAAGACCTACAATTTAAAGATTCGGATGGTTATTGGGTTAAATTAGGTAGAAAAACCAATACTACTCCAATGTCGTCTACGTATTCTTTCTCATTTAGAATGAGTAAAGGTATGGGACTTGAAACAGCAGATGGGACGCCATTTGTAATCTTTGACCCTAGCACTACAGTAGGAGCTAACCGTCTTACCGTAATGGGCGATATTCTTGGCCGTCAGATTAAAGATGAATCCGGTCGAGTATTTTCACCTGGTAACACCCCTACTAAAGCCCAGGTTGGATTAAGTGATGTAGATAACGCAAAACAGGTCCAAATAAATAATAGTAACATACAATCTATGGCTGGTGTTCTTTCAGCCCCGAATTTTATATCTAGGAACCCAGGTACATTGAACGAACACGTTCCTCGTATTGACCAGGTTGTTCTTAGAGGTACATCTGAAGATTTTGGATATTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d8a4bca3ff118e4d1b2edd19c62e9df1c150e799ee96db6ebff917c647879a2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6221
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Exploring the Remarkable Diversity of Culturable Escherichia coli Phages in the Danish Wastewater Environment Olsen,N.S., Forero-Junco,L., Kot,W. and Hansen,L.H. 2020 — GenBank