Protein

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Genbank accession
CAL9960993.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIAHTNLQVGDWCKVISPLSDFVIQTSSSDYQLDNGLWAREITQASASPVWEDRQEGDGTTTAFDRPGPDGEDPESFQVTVDGILQRPNVGYSVSPGQINFSEAPPAGALVDIVYWKPVTVDTVDGANVTEALVVSEAGFSRTVGDRFADVANVKDFGAVGDGVTDDTAAIQNAIDASDYGVLLSNGSFRVVGNIVLPEGKSLTFGNGSLLLVGSIEINGRIRAGRDHIFKYTGNVEDHITGFADVRELYPEWFGATQSTDIDVVDATKGINDSLRYAYESKVYKVTLSGNIAAYFPNNRSYKISNLIIPSKVLLEGQGRDQTLLEMITGATGNVIEDWSVTGAEGVRLKGFRIDCKSNTNTRGIYLGFNPAFVWGVEGIIEDVMVRNASQVGIHIQGSVSNMRQVTLIGCNIGLQFEGGSTYAYTVVCDNCDVPVWFKGSGHKIYGFHAEASIQNHVAVWDENSTECVIHGGVYLRGTTNPAISVFLFRSGTRNNGFYDFINQGSYPSTNTIPYIIDEQYNIGEVLGDVETYLQGSDKMPIMILDDTVIGVDNQYRMDNPSNTYTWMGTIPGGIIRMPSISNRLTHTEIKIVNASPHDLNLQPNEVDLGKSIFYGLSNNVKIEPYATVDVRIISDSIVATSPYVTF
Physico‐chemical
properties
protein length:647 AA
molecular weight: 70440,81330 Da
isoelectric point:4,58488
aromaticity:0,09428
hydropathy:-0,12720

Domains

Domains [InterPro]
DC_0607
STR
107–290
DC_0607
IPR012334
STR
122–247
IPR012334 IPR012334
IPR011050
STR
149–487
IPR011050
IPR024535
ENZ
152–201
IPR024535 IPR012334
CAL9960993.1
1 647
Architecture
STR
STR 107-575 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CAL9960993.1
1 647
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,9018
Central domain 199 543 346 0,9121
C-terminal 544 647 103 0,9183
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-543
C-terminal
544-647

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage D69
[NCBI] 		3105312 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CAL9960993.1 [NCBI]
Genbank nucleotide accession
OZ195729.1 [NCBI]
CDS location
range 37595 -> 39538
strand +
CDS
ATGATTGCTCACACTAATCTCCAGGTTGGCGATTGGTGTAAGGTAATCAGCCCACTGTCTGATTTTGTAATTCAGACGTCATCCTCCGATTATCAACTAGACAACGGACTGTGGGCTCGTGAGATCACTCAAGCATCTGCAAGTCCTGTATGGGAAGATCGTCAAGAAGGTGACGGTACTACCACAGCGTTCGATCGTCCAGGCCCGGATGGAGAAGACCCTGAGTCTTTCCAAGTAACCGTAGATGGCATCCTTCAGCGTCCGAATGTAGGCTACTCGGTAAGTCCAGGTCAGATCAACTTCTCAGAAGCTCCTCCAGCTGGTGCACTAGTAGACATAGTCTACTGGAAGCCTGTAACCGTAGATACGGTAGATGGCGCTAATGTAACAGAGGCACTAGTAGTCTCTGAAGCCGGCTTCAGTCGCACTGTAGGTGATCGTTTCGCTGACGTAGCTAACGTCAAGGACTTCGGGGCCGTCGGAGATGGTGTAACTGATGACACAGCGGCCATACAGAATGCTATTGATGCATCGGATTATGGAGTATTACTTAGTAATGGTAGCTTTAGAGTAGTGGGTAACATCGTACTTCCAGAAGGTAAGTCACTAACGTTCGGTAATGGCTCATTGTTACTAGTAGGCTCTATAGAAATAAATGGTAGAATACGAGCAGGTAGAGATCATATCTTTAAGTATACAGGTAATGTAGAAGACCATATAACGGGGTTTGCAGATGTTAGAGAGTTATACCCAGAATGGTTCGGGGCGACCCAGTCTACGGACATCGATGTTGTAGATGCAACCAAAGGCATAAATGATTCATTACGTTATGCTTATGAGAGTAAAGTATATAAAGTTACTCTCAGTGGAAATATTGCTGCATACTTCCCCAATAACCGCTCATATAAAATTTCCAATCTAATTATACCTTCCAAGGTTCTGCTAGAAGGCCAAGGAAGAGACCAGACGCTACTAGAAATGATTACTGGAGCAACAGGTAATGTAATAGAGGATTGGAGTGTTACGGGGGCTGAAGGAGTTAGGCTTAAGGGTTTTCGTATTGATTGTAAATCCAATACGAATACTAGGGGGATTTATCTGGGTTTCAATCCTGCGTTTGTATGGGGTGTAGAAGGAATCATTGAAGATGTAATGGTTCGTAATGCTTCACAAGTTGGTATCCATATACAAGGTTCTGTGTCTAACATGCGACAAGTAACTTTGATTGGATGTAATATAGGACTGCAATTTGAAGGGGGTTCTACTTATGCTTACACCGTAGTATGTGATAATTGTGATGTTCCAGTATGGTTTAAAGGTTCGGGTCATAAAATATATGGTTTCCACGCAGAAGCCTCTATCCAAAACCATGTAGCGGTATGGGATGAGAACTCAACAGAATGTGTTATTCACGGTGGTGTTTACCTAAGAGGAACGACTAACCCTGCTATTTCTGTATTCTTATTTAGAAGCGGAACACGTAACAACGGATTCTATGATTTTATTAACCAAGGAAGTTACCCATCCACTAATACAATTCCATACATTATTGATGAGCAGTATAATATAGGGGAGGTGCTAGGAGATGTAGAGACATACCTCCAAGGATCTGATAAGATGCCTATTATGATTCTTGATGATACGGTCATCGGAGTAGATAATCAATACAGAATGGATAACCCAAGCAATACCTATACTTGGATGGGGACTATCCCAGGTGGTATTATTCGTATGCCCTCAATCTCAAACCGCCTAACTCATACAGAGATTAAGATTGTTAACGCGTCACCTCACGACTTAAACTTACAACCGAATGAAGTAGATTTAGGTAAAAGTATTTTCTATGGGCTGTCTAACAATGTTAAGATTGAACCATACGCTACAGTAGACGTAAGAATTATCTCCGACTCTATTGTTGCTACTTCGCCATACGTGACCTTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
de947ba2ed4fba31c646c2b65720884d2fe8376ba95c542af1ac11a6d6315532
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7633
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50