Protein

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Genbank accession
AGH26531.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARTVPGTGADIEPIFDEVFGVRAVRVVNGGSGYTQADPPRLTVTGCGTPTREAILYPIIDEDSGQIIHVRVLDRGLGYDPLRVQIIPEQETPNVVNSFNFTRIFQSHPNSSTTATFGTTGTPAKLTDRLTIVSDNHPKPSQVYANERQPGGSGDLVDRNFNQTFIYRGGKDVPNPGTREFQRNKSLGILANGGLLHTPEWGNNVGGAPINFAIDTVKYDYVKNTSANDTIIHNNVHYYQTSKTIDEFDDANGVFEWGNQEVFTWKVKVEFDNVMFNVTNVDETLGQVEVGRIVDEVGGTGRGIISKIVKDSQNVVVRIYLRSLTGDAFSQDDLCLGSNGFSFKINGAPITFPNGIFYIEFGEEAHEFGAFTPGVYYFSPENIKVQKNYVIIWDQSDASNQQGNAPHPMRFSTTADGTLNGGTLYYNSTGSSGAYAADYEASLQPIFIMNADETQKIYYYCGNHRYMSGYAGDEGYMILDTSAEEEDEVNMNNYYVEGFFGTAAAGTLDYSRYANGHSRIIGMSFDGYPIYGPYGKIGNTIAREKSGYRLRTVPELQGARPIVTTSGTVTYAVTMSNNKFLFDGASPTFLTLDRGKTYIFNQLDSSNAPSNHIFISPTDDGWHAGLVGDTNYLFSGQGVEYWIDGSQRPYQTYVSLFNTATTQREVRFTVPVDSPGLLYLFAYVTAGAGLRLVTRGYQLGDLVNDYIFDESPAWSSTASFVQYDTVRNAGYIYEATASISAGGTAPTHTSGTTNNWKYLDVVGTLDYYNGRFSTTPEYPNGTYAYYMTEDASGAPKYPYAIGPKYYGVPLFEGDTVPPLTTNFPEGAEAEVVLSTTNAGQLDYIRMTKFGDNYFGPAQARILGGQGTGALGSPVVQTVTGLSLLNPGRNYATPPTLIFEGGGGQGAQGAAEIDILGKVTNVNIVNPGEFYQEPPYILITGGGGIGAKAIATIDQGAITGITVTEPGVGYTSVPNVIFTKLVQLKRKTRARQAFNSSAIYLTGLIKSVTANDANIYVDSTDAYPGSGSIILNRETISYTSKSAGKFTGLTRGVNFNYDQRVILDPGQNDSNGVSLYKFTVGDRVIRRVENQNNKVAKVYDWDPNTRELLVTFEVDELAFIDGGRAATEDAIVQFDGGVADSSAAGVLPHVILTTAGSTIDLLTEPLSVLQDRSFEDIIPTGAPDGIPDLSNANTTYANQISLDGGIYNSLYGIEETQGGQNTTLFQVGDNIKDGDIPFKFATITTAGGLSEGVEHTALINITLDQTTGNGQNFSTNEIVSGSVSGVQATVVSWIPSTGVLQVKDVIPFNTNNINVGIAGYLYEFSSKNTITDFVITNPGTNYTAAPTVAIENTGDIQATGTVVMTPQGDQVASITINNGGYGIPQTVDGTYALHPTVTFTNNASDTTGSGAAAQAVLGGELINGNGGASYRIKSIEYSAIVRSK
Physico‐chemical
properties
protein length:1443 AA
molecular weight: 155356,06730 Da
isoelectric point:4,66179
aromaticity:0,10603
hydropathy:-0,24401

Domains

Domains [InterPro]
DC_0042
ATT
3–89
DC_0042 IPR025924 DC_0832
DC_0832
ATT
80–1079
DC_0832
AGH26531.1
1 1443
Architecture
ATT
ATT 3-1440 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH26531.1
1 1443
Domain Start End Length (AA) Confidence
N-terminal 1 118 118 0,9737
Central domain 119 711 594 0,4358
C-terminal 712 1443 731 0,0788
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-118
Central
119-711
C-terminal
712-1443

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage P-RSM3
[NCBI] 		536446 Uroviricota > Caudoviricetes > Pantevenvirales > Ronodorvirus > Ronodorvirus ssm4
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH26531.1 [NCBI]
Genbank nucleotide accession
HQ634176 [NCBI]
CDS location
range 1557 -> 5888
strand -
CDS
ATGGCAAGAACCGTTCCTGGTACTGGTGCCGACATTGAACCTATTTTTGACGAAGTATTTGGTGTACGTGCGGTAAGAGTTGTAAATGGTGGATCTGGATATACACAGGCAGACCCACCACGACTTACTGTGACTGGTTGTGGAACTCCAACACGAGAAGCAATATTATATCCAATAATAGATGAAGACTCAGGACAAATTATTCACGTTCGTGTTCTTGATAGAGGTTTAGGTTATGATCCATTAAGAGTACAAATTATTCCTGAACAGGAAACTCCTAATGTTGTAAATTCTTTTAATTTTACAAGGATATTTCAATCTCATCCAAATAGTTCTACCACTGCAACATTTGGGACTACTGGAACTCCAGCTAAGTTAACAGATAGATTAACTATTGTATCAGATAATCATCCTAAACCATCACAGGTTTATGCTAATGAAAGGCAACCTGGTGGTTCAGGAGATCTTGTAGATAGAAACTTTAATCAAACCTTTATATACAGAGGTGGTAAGGATGTTCCTAATCCAGGTACTAGAGAGTTTCAAAGAAATAAATCACTCGGTATATTAGCAAATGGTGGTCTTTTACATACACCAGAATGGGGTAATAACGTTGGTGGAGCACCTATAAACTTTGCTATTGATACAGTCAAATATGACTATGTAAAAAATACCAGTGCAAATGATACTATAATTCATAATAACGTACATTATTATCAGACAAGTAAAACTATAGATGAATTTGATGATGCCAACGGTGTATTTGAATGGGGTAATCAAGAAGTATTCACATGGAAAGTTAAGGTAGAATTTGATAATGTGATGTTTAATGTCACTAATGTAGATGAAACATTAGGACAAGTAGAAGTTGGTAGAATAGTTGATGAAGTTGGTGGGACAGGTAGAGGTATAATTTCAAAAATAGTAAAAGACAGTCAAAATGTTGTAGTAAGAATATATCTAAGAAGTCTTACAGGAGATGCTTTCTCACAAGATGATCTATGTCTAGGATCTAATGGATTTTCATTTAAAATAAATGGTGCACCAATAACATTCCCAAATGGTATTTTTTATATTGAGTTTGGTGAAGAGGCACATGAGTTTGGTGCTTTTACACCAGGTGTATATTACTTCTCTCCAGAAAATATTAAAGTACAAAAGAATTATGTAATTATATGGGATCAATCTGACGCTTCTAATCAGCAAGGTAATGCACCACACCCTATGCGGTTCTCTACAACTGCTGATGGCACATTAAATGGTGGAACATTATATTACAATAGTACAGGTTCTTCTGGTGCATATGCTGCAGATTACGAAGCTTCATTACAACCAATATTCATAATGAATGCGGATGAAACGCAAAAAATATATTACTATTGTGGTAATCATCGTTATATGTCTGGATATGCAGGTGATGAAGGATATATGATTCTTGATACCTCTGCTGAGGAAGAAGATGAAGTAAATATGAACAACTATTATGTTGAAGGATTTTTTGGGACTGCTGCAGCAGGAACATTAGATTATTCAAGATATGCAAATGGACATTCTAGAATCATAGGTATGTCATTTGATGGTTATCCTATTTACGGACCTTATGGAAAAATTGGTAATACTATTGCAAGAGAAAAATCAGGTTATAGACTGAGAACAGTTCCTGAACTACAAGGTGCTAGACCTATAGTCACTACATCTGGTACAGTGACTTATGCTGTGACAATGTCAAATAATAAATTTTTATTTGATGGAGCATCTCCTACATTCTTAACTTTAGACAGAGGAAAAACATATATCTTTAATCAATTAGATTCATCTAATGCTCCATCTAATCATATCTTTATATCTCCAACAGATGATGGTTGGCATGCAGGTTTAGTTGGTGATACAAATTATCTCTTTTCGGGACAGGGAGTAGAATATTGGATTGATGGTTCACAAAGACCATATCAAACTTATGTAAGTTTGTTTAATACTGCTACTACACAAAGAGAAGTGCGTTTTACAGTTCCTGTAGATTCACCTGGTCTTTTATATCTCTTTGCTTATGTGACTGCAGGTGCAGGATTAAGATTAGTCACTAGAGGTTATCAATTAGGAGATCTTGTAAATGATTATATTTTCGATGAATCACCTGCATGGTCAAGTACAGCGAGTTTTGTTCAGTATGATACTGTAAGAAACGCAGGGTATATCTATGAAGCGACTGCATCGATAAGTGCAGGTGGTACTGCACCTACACATACAAGTGGTACTACAAATAACTGGAAATACTTAGATGTTGTAGGAACTTTAGATTATTATAATGGTAGATTTTCTACCACACCAGAGTATCCAAATGGAACTTATGCATATTATATGACTGAGGATGCTTCAGGTGCTCCAAAATATCCTTATGCTATAGGTCCCAAATATTATGGTGTGCCTTTATTTGAAGGTGATACTGTTCCTCCTTTAACAACTAATTTCCCAGAGGGTGCTGAGGCAGAAGTTGTTCTAAGCACAACTAATGCAGGACAACTTGATTATATTAGAATGACTAAGTTTGGTGATAATTACTTCGGTCCTGCACAAGCAAGAATTTTAGGTGGTCAAGGTACTGGTGCTTTGGGCAGTCCTGTAGTGCAGACAGTGACAGGTTTATCACTATTAAATCCAGGTAGAAATTATGCTACTCCTCCAACACTTATCTTTGAAGGTGGTGGTGGACAGGGTGCACAAGGTGCTGCTGAAATAGACATCTTAGGAAAAGTCACAAATGTCAATATTGTAAATCCAGGTGAATTTTATCAAGAACCTCCTTATATTCTTATCACTGGTGGTGGAGGTATCGGTGCAAAAGCAATAGCAACTATTGATCAAGGTGCTATTACAGGTATAACTGTTACTGAACCAGGCGTAGGATATACTTCTGTACCTAATGTTATCTTTACAAAATTAGTACAATTAAAACGTAAGACAAGAGCAAGACAAGCATTCAACTCTTCTGCAATTTACTTGACTGGATTAATCAAGAGTGTCACTGCTAATGATGCAAACATATATGTTGACTCTACTGATGCATATCCTGGTTCTGGATCTATTATTCTTAATAGAGAGACAATAAGTTATACTTCTAAATCTGCAGGTAAATTTACTGGTTTAACTCGTGGTGTAAACTTTAATTATGATCAAAGAGTTATATTAGATCCTGGTCAAAATGATTCTAACGGTGTATCACTTTACAAATTTACTGTAGGTGATAGAGTTATTAGAAGAGTTGAAAATCAAAATAATAAAGTTGCTAAAGTATATGATTGGGATCCAAATACAAGAGAACTACTTGTCACATTTGAAGTTGATGAACTAGCATTTATTGATGGTGGTAGAGCAGCGACTGAAGATGCTATTGTACAATTTGATGGTGGTGTTGCAGATAGTTCTGCTGCAGGTGTATTACCACATGTAATTCTTACAACTGCAGGTTCTACCATAGATTTATTAACTGAACCTTTATCTGTATTACAAGATAGATCTTTTGAAGATATTATACCAACTGGTGCACCTGATGGTATTCCAGATTTGAGTAATGCTAATACTACATACGCTAATCAAATATCATTAGATGGTGGTATATACAATTCACTCTATGGTATTGAAGAAACACAGGGTGGACAAAATACCACTCTATTCCAAGTTGGTGATAACATCAAAGATGGAGATATACCATTTAAGTTTGCAACAATTACCACTGCAGGTGGATTATCTGAGGGTGTTGAGCATACTGCATTGATCAATATAACATTAGATCAAACAACTGGTAATGGTCAGAACTTCTCTACTAATGAGATAGTTAGTGGTTCTGTGTCTGGTGTACAAGCAACTGTTGTTTCTTGGATACCTTCAACAGGTGTATTACAAGTTAAGGATGTTATACCTTTCAATACCAATAATATAAATGTTGGTATTGCAGGTTATCTTTATGAGTTTTCATCAAAGAATACCATTACTGATTTCGTTATAACTAATCCTGGCACTAACTATACTGCTGCTCCTACTGTAGCAATAGAGAACACAGGTGATATACAAGCAACTGGTACTGTGGTTATGACTCCTCAAGGAGACCAAGTTGCATCAATTACTATCAATAATGGTGGATATGGTATTCCACAAACTGTAGATGGAACATATGCCTTACATCCTACAGTCACATTCACTAATAATGCCAGTGATACAACTGGATCTGGTGCAGCTGCTCAGGCAGTTTTAGGTGGAGAACTCATCAACGGAAATGGCGGTGCCTCTTATAGAATTAAGAGTATCGAATATTCTGCAATAGTTCGATCGAAATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
ba4f02c5da635ba9b83265696b7b5254ce1ed427600d781f389695e9a01e9c26
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4345
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage P-RSM3 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank