Protein

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Genbank accession
CDL18767.1 [GenBank]
Protein name
structural protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,52
Protein sequence
MYQRPILAQKKPAQRKSDLKKFHAPTGGWISNRNLSTPMENGGPQGAAVLDNFFPTSTTAILRRGKELYATLGQGDEGVTSLFTYVNGLNRKLFASTENTIYDITNILVPYNYRLVTENGDYLVTENGDYFGQSSTEDMEAFEGALGGNWITVQFATTGGIYLIGVNGASTGFIYDGNAFYPYIPSGVWALSYDNVIQDFSVGEVITGDTSGAEGTVSEILPGGGLVLKDIVNAKNVYSMSFRDATDDIKVGMSLEGVDSGAKADVKTVSGVVSRYAINYVTKTANFTVGETVTGGTSSATCVVVSINADDDTKGQLVVSTVSGAFVVGEKLTGSVSGAATSSTVVYTRYDGNIEIEGMTGSFVSGELIRGADGITAYANSSPVYISGGSFLYNEMLTGDQGGSAQAASVLSNIVPGVAFPDGLTTADMSYVWAFKNRLWFAQKESLNIWYMDAPDAVGGDPVVYPMGGILTLGGSVLWGDSWSMGTGAAGGLSDQMVVTSTEGEVAVFQGSYPEATGDWSHVGTYRIGRPLGNRAHFRGGGDIAVATSVGLIPLSKAISLDVTALSPAAVSYNIQDAWQQAVYGRGLEDWSCMLWPERKMAIISPPITIGDYDPVLFISNSETGAWCRYTNWDARAMCVFQGEMYFGGPNGEVFKANVTGMDNGSVYTGVYIPLFDDLGSPANLKIPKMGRGVARAKANLSYGLRFKADFDIDPGSAPTASSADVSNAWGTGVWGQSVWGGTNTNVFNAQWKSLGGTGYYVSACYQVTSGSSVPLDVEIVHLEISLTMGEIVT
Physico‐chemical
properties
protein length:794 AA
molecular weight: 84069,02350 Da
isoelectric point:4,54254
aromaticity:0,10579
hydropathy:-0,01436

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
CDL18767.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 211 211 0,8602
Central domain 212 437 227 0,6244
C-terminal 438 794 356 0,3246
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-211
Central
212-437
C-terminal
438-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Brucella phage F1
[NCBI] 		1401446 Uroviricota > Caudoviricetes > Perisivirus >
Host Brucella sp.
[NCBI] 		52132 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
CDL18767.1 [NCBI]
Genbank nucleotide accession
HG428758 [NCBI]
CDS location
range 11885 -> 14269
strand +
CDS
ATGTACCAGCGCCCTATCCTCGCGCAGAAGAAACCGGCGCAACGTAAGTCAGACCTTAAAAAGTTCCATGCACCTACAGGCGGGTGGATTAGCAACCGCAATCTGTCTACGCCTATGGAAAATGGCGGGCCACAAGGTGCTGCTGTACTTGATAACTTCTTTCCAACGTCTACCACAGCTATTCTTCGAAGGGGTAAAGAGCTTTATGCCACTCTAGGCCAGGGGGATGAAGGCGTAACGTCCCTGTTTACATACGTTAACGGCTTGAATCGTAAATTGTTCGCGTCTACCGAAAACACCATTTACGATATTACCAATATCCTCGTTCCTTATAATTACCGACTGGTGACAGAGAATGGCGATTATCTGGTCACTGAAAACGGTGATTACTTTGGTCAATCGTCTACCGAAGATATGGAAGCCTTTGAAGGCGCATTAGGCGGTAATTGGATTACTGTACAGTTTGCCACTACTGGCGGAATATACCTTATTGGCGTTAACGGAGCGTCTACAGGCTTCATTTATGATGGCAATGCTTTTTATCCTTATATCCCTAGTGGGGTTTGGGCTTTGTCTTACGACAATGTAATACAGGATTTTTCTGTAGGAGAAGTGATAACGGGTGATACTTCCGGGGCAGAAGGTACAGTAAGTGAGATTCTGCCAGGAGGAGGGCTTGTCCTAAAGGATATAGTTAACGCAAAGAACGTATATTCAATGTCATTTAGAGACGCGACTGATGACATTAAAGTTGGCATGTCTCTGGAGGGGGTAGATAGTGGGGCTAAGGCTGATGTAAAAACCGTATCAGGTGTGGTCAGTAGATATGCTATAAACTATGTTACAAAAACTGCTAATTTCACAGTTGGTGAGACCGTAACTGGCGGTACGTCATCTGCTACGTGTGTCGTAGTTTCAATAAATGCTGATGATGATACAAAGGGGCAGCTTGTAGTATCTACTGTAAGCGGAGCGTTTGTCGTAGGTGAGAAACTTACCGGTTCTGTGTCTGGCGCAGCCACTTCATCGACAGTCGTTTACACAAGATATGATGGCAACATAGAAATTGAGGGAATGACCGGGTCTTTTGTTAGCGGAGAGCTAATAAGGGGGGCAGACGGGATTACAGCATACGCTAATTCGTCCCCCGTTTACATTAGTGGCGGGAGCTTTTTATACAATGAAATGCTAACCGGAGACCAAGGTGGGAGCGCCCAAGCTGCTAGCGTTCTATCAAACATTGTGCCGGGCGTTGCGTTCCCAGACGGTTTAACAACTGCTGACATGTCTTACGTTTGGGCATTTAAAAACCGTCTTTGGTTCGCCCAGAAGGAATCCTTAAACATATGGTATATGGATGCCCCAGACGCTGTAGGCGGTGATCCTGTTGTTTACCCTATGGGTGGTATATTAACCCTTGGCGGGTCCGTCCTGTGGGGCGATTCATGGTCTATGGGAACAGGTGCTGCTGGCGGTTTGTCTGACCAGATGGTTGTAACGTCCACGGAGGGTGAGGTTGCAGTATTTCAAGGAAGTTACCCAGAAGCTACAGGCGACTGGTCGCATGTTGGCACATACAGAATTGGCCGGCCTCTTGGCAATCGCGCTCATTTCAGAGGCGGCGGTGATATTGCTGTTGCTACTAGTGTTGGCCTTATTCCTCTTTCCAAGGCTATCAGTCTTGATGTAACGGCTCTTTCTCCTGCCGCTGTTTCGTACAACATTCAAGACGCATGGCAGCAGGCCGTCTACGGTCGCGGCCTTGAGGATTGGTCTTGTATGCTTTGGCCTGAACGTAAGATGGCAATCATATCTCCGCCTATTACAATCGGTGATTATGATCCAGTTTTGTTTATTTCCAATTCTGAAACAGGTGCATGGTGCCGTTATACCAATTGGGACGCTCGCGCTATGTGCGTATTCCAGGGAGAGATGTATTTTGGTGGCCCTAACGGTGAAGTGTTCAAAGCCAATGTAACAGGCATGGACAATGGGTCTGTTTACACTGGCGTTTACATCCCACTGTTTGATGATCTTGGATCGCCAGCCAATCTTAAAATCCCTAAGATGGGCCGTGGCGTAGCAAGGGCAAAGGCTAATTTGTCTTATGGCCTTCGCTTCAAGGCTGATTTTGATATTGATCCGGGCTCTGCTCCAACGGCATCGAGCGCGGATGTCTCTAATGCATGGGGTACAGGTGTATGGGGGCAGTCTGTATGGGGTGGAACCAATACTAATGTTTTCAATGCACAGTGGAAATCATTAGGAGGAACGGGTTACTACGTTTCTGCCTGCTATCAGGTGACGTCAGGTAGTTCTGTTCCTCTTGATGTTGAGATTGTCCATTTGGAAATCAGCTTAACAATGGGCGAGATTGTAACTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
295be135ea20a91c77994b7d76b6af706d99cfb7dcf4c5c2b6cb3a9fe79545e0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2809
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
F1 and tbilisi are closely related brucellaphages exhibiting some distinct nucleotide variations which determine the host specificity Hammerl,J.A., Al Dahouk,S., Nockler,K., Gollner,C., Appel,B. and Hertwig,S. 2014 24482520 GenBank