Protein

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Genbank accession
XPD06403.1 [GenBank]
Protein name
non-contractile tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAFSWQESVKPAGTQDIQCDIEYIDKSYIHVYLDGTETAAFTWTSDTNIRLDSALSADSKVLLVRKTEREYLYIQFASGAPFIEGNVDTQNTQFLHLAQELVEGRAIEGFYGDISMNGYRITNVGAPVDAGDAATKGYVDSGDTALDTRISAEVSALDTKISAEVTARIRGDIKALDDAKDYTDSSLAGVILPQGMTDVGYWLPSAVSLMGASTELTPIGVRGFYRAQDGGAGVWVKTGNVDLSLARKHFPASAVLYTAEGVEYRLKVESGDTVDARANGLRAIDEGTSVDDQTEDFTCVAEAVNGITGLVKTMVNDEDLKTYLKVVIPAVGTLRQGKSAIKAYSRLTLDFQQCSVYTRPSPLNRQEVTGVYMNSIERGIEDIQYISNLFSGATSYSNMTLSDFHIIGGRFYGDHKTTLGVAECSTGTGILTYNMENSTLNGCWFQNYAVGRQYVRTVPGYYYNNLGQKVLGTLVPEVATSGIGSYEGVHESDVTSYGLRYLHLRTVSNWGRFDKCKFGTYANWASSPDGSQFDYFIENWGAGVVFTSGVIEANNMNAGPLKGYVLDSARGVCVLGLYYENATAPGWVISKPANSFYYRGNGLHLDNLGSYYLTNSRGQPLVAFEEGFFGSYNANGEYERGGWETYYNYFAGPNTWAVGSPTPDLGAFPHGVYDFKFGTYGIHYSGNVPDVDSVRDTLWGNEFLSPYGLQVNSGTLLLPMANPAHQSNIVVWFKDLTGNFDVHNLSVGWNDNNNAEDGSSVNLYQTYGVRLFDYRNGYKAALIPYVNPRATDSRMYTSAGNKLRIVVDSSAPIILKAVQAFVGGVPIFPSKAPEYIPRTQADRVWGTMKSGDTSSGAYYGSRVGGGIFKPGDVVTAFSPFANADLRAPAKYQDISSTYGINTETSIITGGAAWGAGLSGATFNLTITAVDSGNSWTTVQVPTGNLPHVICGLPLNVIANSSGGSTGFINIIKRVSNGDGTLSNEYVLEGLLGSVGGTLTVSTSSAYTVATGVSRKLTGTTNSFSVSSWLSVVGGDSRVGYGATSAGTRQIRYYYNGSDVSAGMGSAGANTAYITGTGGITLNGSILSSITYSFGTSSAYPANIYSQNAVTVVSDATRKEGIRELNSAEIKLSSLLAKLFRAYKLKSAIAEKGDAARLHVGTIAQLVIDAFTEAGLDWHQYGVVTYERWDAADEVLDDDGVVVTPAREAGEIYMVRYDELNALILAGQEARIAALESALSKEE
Physico‐chemical
properties
protein length:1242 AA
molecular weight: 133586,01480 Da
isoelectric point:4,95849
aromaticity:0,10870
hydropathy:-0,14783

Domains

Domains [InterPro]
DC_1609
STR
1–471
DC_1609 cd10144
IPR005604
ATT
13–103
IPR005604 IPR036388
IPR030392
CHP
1113–1238
IPR030392
IPR030392
CHP
1113–1175
IPR030392
XPD06403.1
1 1242
Architecture
STR
ATT
STR
RBD
STR 1-12 | ATT 13-103 | STR 104-471 | RBD 1113-1240 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPD06403.1
1 1242
Domain Start End Length (AA) Confidence
N-terminal 1 291 291 0,9930
Central domain 292 1003 713 0,9789
C-terminal 1004 1242 238 0,9189
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-291
Central
292-1003
C-terminal
1004-1242

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnP_W17
[NCBI] 		3239059 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPD06403.1 [NCBI]
Genbank nucleotide accession
PP728208.1 [NCBI]
CDS location
range 36656 -> 40384
strand +
CDS
ATGGCATTCAGCTGGCAAGAGTCGGTAAAGCCTGCAGGTACGCAGGATATCCAGTGTGATATCGAGTACATTGATAAGTCCTACATTCATGTCTACTTAGATGGTACCGAGACTGCCGCCTTCACGTGGACCAGTGATACCAACATCCGACTAGACTCCGCCCTTAGTGCAGACTCTAAAGTGTTGCTCGTTCGTAAGACGGAGCGGGAGTATCTTTACATCCAGTTTGCTAGTGGTGCGCCGTTTATCGAGGGCAACGTGGATACGCAGAATACCCAGTTCCTGCACTTGGCCCAGGAATTAGTGGAAGGTCGCGCTATTGAGGGATTCTACGGCGACATCAGTATGAACGGGTATCGCATTACTAACGTAGGCGCCCCAGTGGATGCCGGCGATGCAGCCACTAAAGGTTACGTAGATTCAGGGGATACGGCCCTAGATACTAGAATATCTGCAGAGGTATCTGCTTTAGATACAAAAATATCTGCAGAGGTAACTGCCAGGATTCGCGGCGACATCAAAGCCTTAGATGACGCTAAAGACTATACCGATTCGTCTCTAGCGGGGGTAATCCTCCCGCAAGGTATGACCGATGTAGGTTACTGGCTGCCGTCGGCTGTATCCCTTATGGGGGCCTCTACAGAGTTAACCCCCATTGGTGTACGTGGCTTCTACCGCGCACAAGATGGCGGCGCAGGGGTGTGGGTAAAAACGGGTAATGTAGACCTAAGCCTGGCCAGGAAGCATTTCCCCGCCAGTGCAGTCCTGTATACCGCAGAAGGTGTAGAGTACCGCCTCAAAGTAGAATCTGGTGACACAGTAGATGCACGCGCCAACGGGCTGCGCGCCATCGACGAGGGCACCAGCGTAGATGACCAGACGGAGGATTTTACCTGTGTAGCCGAGGCGGTTAACGGTATAACCGGACTGGTTAAGACTATGGTTAACGATGAGGATTTGAAAACCTACCTGAAAGTCGTCATCCCGGCAGTGGGTACTCTCCGACAGGGCAAGTCAGCAATCAAAGCCTACTCAAGACTGACACTTGATTTTCAACAGTGTTCGGTGTATACCCGCCCCAGTCCATTAAACCGCCAGGAAGTGACTGGCGTGTACATGAACTCTATTGAGCGTGGTATTGAGGATATTCAGTATATATCCAACCTATTCTCGGGAGCCACGTCATACAGTAATATGACCCTATCTGACTTCCACATAATCGGTGGGAGATTCTATGGGGACCACAAGACTACCTTAGGTGTGGCTGAGTGTAGTACTGGTACCGGTATCCTGACTTACAACATGGAAAACTCCACCCTGAATGGGTGTTGGTTCCAGAATTATGCTGTTGGTCGTCAGTACGTGCGCACTGTGCCCGGATACTACTACAACAACCTCGGACAGAAAGTACTGGGTACGTTAGTGCCAGAAGTAGCTACTTCTGGTATCGGCTCGTACGAGGGGGTGCACGAGTCTGATGTTACATCCTACGGGCTGCGCTACCTGCATCTCCGGACGGTATCTAACTGGGGTAGGTTTGATAAGTGCAAGTTCGGGACTTACGCCAACTGGGCCAGCAGTCCTGATGGGAGTCAATTTGATTACTTCATCGAGAACTGGGGTGCTGGCGTAGTCTTTACTAGCGGGGTTATTGAAGCTAACAACATGAATGCAGGTCCGTTGAAGGGCTACGTCCTGGATTCGGCGCGCGGCGTTTGTGTGCTTGGTCTATACTACGAGAATGCAACCGCCCCTGGGTGGGTTATCTCCAAACCGGCCAATAGCTTCTACTATCGGGGCAACGGTCTGCACCTAGATAATCTGGGTAGTTACTACCTGACCAACTCGCGCGGACAGCCGCTGGTGGCGTTTGAGGAAGGCTTCTTTGGCTCCTACAACGCCAACGGGGAGTACGAACGAGGTGGCTGGGAGACGTACTATAACTACTTCGCAGGCCCCAACACGTGGGCTGTGGGTAGCCCTACCCCTGATTTAGGTGCCTTCCCGCATGGTGTGTACGACTTTAAGTTTGGCACTTACGGCATTCACTATAGTGGCAATGTTCCGGACGTAGACTCTGTTAGGGACACTTTGTGGGGTAACGAGTTTCTGTCCCCTTATGGGCTACAAGTAAACTCCGGGACCCTACTGCTCCCTATGGCAAACCCAGCACACCAAAGCAACATAGTTGTGTGGTTTAAAGACCTGACAGGTAACTTTGACGTACACAACCTGTCGGTCGGTTGGAACGATAATAATAATGCCGAGGATGGCAGTTCGGTTAACCTGTACCAGACTTACGGCGTGCGTCTGTTTGACTACCGTAACGGGTACAAGGCCGCCTTAATCCCTTATGTCAACCCAAGAGCAACCGATTCCAGAATGTACACCAGTGCAGGAAACAAGTTGCGTATTGTGGTAGACAGTTCTGCCCCAATCATACTCAAGGCGGTGCAGGCGTTTGTTGGTGGTGTTCCTATCTTCCCTTCAAAGGCTCCGGAGTACATTCCTAGAACACAGGCCGACCGGGTGTGGGGTACCATGAAATCGGGAGATACTTCCTCTGGTGCATACTACGGCTCCCGGGTTGGTGGTGGCATATTCAAGCCAGGCGATGTAGTAACCGCGTTCTCTCCGTTCGCTAACGCGGACTTGCGAGCACCTGCCAAGTATCAGGATATATCCAGTACGTACGGGATAAACACCGAGACCAGCATCATTACCGGCGGAGCTGCTTGGGGAGCCGGGTTGTCCGGGGCTACGTTTAACCTTACCATTACCGCAGTGGACAGCGGAAACAGCTGGACTACCGTGCAGGTGCCTACTGGGAATTTACCGCACGTAATCTGTGGCCTACCCTTAAATGTCATCGCAAACTCCTCGGGTGGAAGCACCGGCTTCATTAACATCATTAAGCGGGTATCTAATGGTGATGGAACCCTCTCGAATGAGTATGTTTTGGAGGGCTTGCTCGGCTCGGTTGGCGGAACCTTAACGGTGTCCACTAGCTCTGCGTATACTGTAGCGACTGGGGTATCCAGAAAACTCACTGGGACCACCAACTCCTTTAGTGTATCATCTTGGCTCAGTGTGGTTGGTGGGGATTCCCGTGTAGGTTATGGGGCTACGTCTGCAGGGACTCGGCAAATCCGCTACTACTACAACGGCTCTGATGTATCCGCTGGGATGGGTAGCGCGGGTGCCAACACTGCATACATAACGGGTACTGGTGGTATCACCTTAAACGGTAGCATACTCTCATCCATTACGTACAGCTTTGGCACGTCCTCAGCTTATCCGGCAAACATATACTCTCAGAACGCTGTTACGGTGGTGTCCGACGCCACTCGCAAAGAGGGTATCCGAGAGTTAAACTCTGCGGAGATTAAGCTGTCCTCTCTTTTAGCGAAGCTGTTTAGGGCATACAAGCTTAAGTCAGCGATAGCCGAGAAGGGGGATGCAGCTAGGTTGCACGTAGGTACTATTGCGCAGCTGGTTATCGATGCGTTCACGGAGGCTGGGCTGGACTGGCACCAGTACGGCGTAGTTACTTACGAGCGCTGGGATGCCGCTGATGAGGTGCTGGACGACGATGGTGTAGTGGTGACTCCCGCTAGAGAGGCGGGGGAAATCTACATGGTTAGGTACGATGAGCTAAACGCCCTGATTTTAGCAGGGCAAGAGGCGCGTATCGCTGCTTTGGAAAGTGCATTAAGTAAGGAGGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e0d80505db31a40bf3b026041d7f79c3ab718771ef624a77e4640360486c4472
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5533
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50