Protein

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Genbank accession
AFV51555.1 [GenBank]
Protein name
putative tail fiber
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTNPTLITTPFAENGDKNTIPESVGANPQNATMQAGFPPITQQKISEGGIPPERNDFNGILNLYGQHIVHLNKGLPYEFDQAFANAIGGYPLNARLMLDNGDIVKSTVPNNTNNPNSDMTGWVKINSASQIFDESGLSQQEINNGVKSAAALRLLNPNGEGERIYLISFNEGQGEGGGVFISKNKGTLVDDGGTILQSSNASIVYVRINFDSLTPEMFGAKGDDISFDNYLALQAAFKHPLPLEIPPKTYYTTRSIWYTSGKKIKGSGHQKSVICKTTNSTETDLPSSFAKDAVIIARHWSANDYAHYCEFDGFLVTSTVKCEFGLYAPRIAESSFSNFKIHNAIKGFYSDDAWMISMIRVTSSSDRPYIVNMGTSITMNSCWAINARGESSYCYEFNNLYYSTLISCGADNNGLDGSPIKALYRVLNSSITFISCASENNHAYKIFHGQGASVTIVKMTAMRFYNKYKVSNPVWGDENALFDLRSETRLDIKDSAFDGLLNTDTSTSPSWINITDTSYLNYSNVRVNIPITGASVNDTTAFGVKWGSVTTVILDFGTYKIESCVNLPSNLYNPLSTPTNETYSSIFTRGSIRENGRELSTENLNNLRYLGTITFKQSQSAEATLANNYPENGGAWVIQQYSDVATDSSNVNTNTTQIAIRKDSNRIYFRCAPYGGIFTPWYKIYHSGNTTVDANGFLKAI
Physico‐chemical
properties
protein length:701 AA
molecular weight: 77117,08920 Da
isoelectric point:5,68284
aromaticity:0,10842
hydropathy:-0,33324

Domains

Domains [InterPro]
DC_0059
STR
1–471
DC_0059 cd19958
IPR012334
STR
207–547
IPR012334 cd19958
IPR011050
STR
214–544
IPR011050
AFV51555.1
1 701
Architecture
STR
STR
STR 1-547 | STR 599-685 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AFV51555.1
1 701
Domain Start End Length (AA) Confidence
N-terminal 1 227 227 0,9923
Central domain 228 568 342 0,9839
C-terminal 569 701 132 0,9686
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-227
Central
228-568
C-terminal
569-701

Taxonomy

  Name Taxonomy ID Lineage
Phage Acinetobacter phage vB_AbaM-IME-AB2
[NCBI] 		1243183 Uroviricota > Caudoviricetes > Obolenskvirus >
Host Acinetobacter baumannii
[NCBI] 		470 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Moraxellales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AFV51555.1 [NCBI]
Genbank nucleotide accession
JX976549 [NCBI]
CDS location
range 33600 -> 35705
strand -
CDS
ATGACAAATCCAACACTTATTACAACCCCATTCGCTGAAAATGGCGATAAAAACACCATTCCAGAATCAGTTGGCGCTAACCCGCAAAACGCAACTATGCAAGCTGGATTCCCGCCAATTACCCAACAAAAGATTTCTGAGGGCGGTATTCCTCCTGAGCGAAATGATTTTAATGGAATTTTGAATTTATACGGTCAGCATATTGTTCATTTGAATAAGGGTTTGCCTTATGAATTTGATCAAGCATTTGCCAATGCTATTGGTGGTTATCCATTAAATGCAAGATTAATGCTTGATAATGGTGATATTGTTAAGTCTACTGTGCCTAATAATACAAATAACCCTAATAGTGATATGACTGGGTGGGTGAAGATTAATAGTGCCAGTCAGATTTTTGATGAAAGCGGGTTGAGTCAGCAGGAGATTAATAACGGTGTTAAATCTGCCGCAGCATTGAGATTATTAAATCCCAATGGTGAAGGCGAAAGAATTTACCTGATATCATTTAATGAGGGTCAAGGTGAGGGTGGCGGTGTTTTTATTAGTAAAAACAAAGGCACTTTAGTTGATGATGGTGGTACTATTTTACAGAGTTCAAATGCTTCTATTGTCTATGTTCGTATTAACTTTGATTCCTTAACGCCTGAAATGTTTGGTGCTAAGGGTGATGACATTTCATTTGACAATTATTTAGCACTTCAAGCAGCTTTTAAACACCCCCTTCCCCTCGAAATTCCACCAAAAACATACTATACAACACGGTCTATATGGTATACGAGCGGTAAAAAAATTAAAGGTTCTGGACATCAAAAATCAGTGATATGTAAAACAACAAATAGTACAGAAACAGACCTTCCATCCTCTTTTGCTAAAGATGCAGTGATTATTGCTAGGCATTGGTCTGCCAATGATTATGCTCACTATTGTGAATTTGATGGATTCTTGGTAACATCAACTGTTAAATGTGAATTTGGCTTATACGCACCAAGAATCGCCGAATCATCTTTTTCAAATTTTAAGATTCATAATGCTATTAAAGGTTTTTATTCAGATGACGCTTGGATGATATCCATGATTCGGGTGACATCATCATCAGATAGACCATACATTGTAAATATGGGTACTTCTATAACAATGAATAGTTGCTGGGCTATAAACGCACGAGGTGAATCAAGCTATTGTTACGAATTTAATAATCTCTATTACAGCACTCTGATCAGTTGTGGCGCAGACAATAACGGTCTTGATGGCAGCCCAATTAAAGCTCTCTATCGAGTATTAAATAGTAGTATCACTTTTATAAGCTGTGCCTCTGAAAATAATCATGCTTATAAAATATTTCATGGGCAAGGAGCTTCAGTTACTATTGTAAAAATGACAGCAATGCGCTTTTACAATAAATATAAAGTTTCTAATCCTGTTTGGGGTGATGAAAATGCATTATTTGATTTAAGAAGTGAAACCAGATTAGATATTAAGGATAGTGCTTTTGATGGTTTGTTAAATACAGACACATCAACCAGCCCTTCTTGGATAAATATAACTGATACATCGTATTTAAATTATAGTAATGTTCGTGTGAACATACCGATCACAGGCGCATCAGTAAATGATACAACTGCTTTTGGTGTCAAGTGGGGTTCTGTAACCACTGTAATTCTTGATTTCGGAACATATAAGATTGAAAGCTGTGTAAACTTACCAAGCAATCTATATAACCCATTATCAACACCAACAAATGAGACTTACAGCTCTATATTCACAAGGGGTAGTATTCGAGAAAATGGCCGAGAATTGTCTACAGAAAATTTAAATAATTTGCGATACTTGGGAACAATTACATTCAAGCAGAGTCAGTCAGCAGAGGCAACACTTGCAAATAATTACCCAGAAAATGGTGGTGCTTGGGTTATTCAGCAATATTCTGATGTTGCTACTGACTCATCAAATGTAAACACGAACACCACTCAGATTGCAATTAGAAAAGACAGTAACAGGATTTATTTCAGATGCGCTCCATACGGTGGGATTTTTACACCTTGGTATAAAATATATCACTCTGGAAATACAACTGTAGATGCAAATGGGTTTTTGAAAGCCATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6227fa3a06d0f30acf294b45d94f63d1075c02759985da152bf738930132e164
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7712
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization, sequencing and comparative genomic analysis of vB_AbaM-IME-AB2, a novel lytic bacteriophage that infects multidrug-resistant Acinetobacter baumannii clinical isolates Peng,F., Mi,Z., Huang,Y., Yuan,X., Niu,W., Wang,Y., Hua,Y., Fan,H., Bai,C. and Tong,Y. 2014 24996449 GenBank